Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00063 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTAGAGCGCAAGGAAGAGGGAAAGAGCCAAAGTGGCTCATTGAATGAACAGACAACAGACCTTGAACGTGGTGAAGCAGCAACAAATGTGGGATTTGGCAGGGTGCTCTCACTTGCAAAGCCTGAAGCTAGGAAGCTGATTTTCGCAACTCTGGCTCTTTCAATTGCATCCACATCAGAAATTTTAGTTCCAAAATTTGGTGGGAAGGTAATTGATATTGTCTCAGGGGATATTCAAACTCCTGAAGATAAAGCTAAAGCTTTGGAAGCAGTCAAGAGCACCATACTGTACATTTTTATGATTGTTGTTGTTGGATCAGTTTCAACAGCACTTGATGGTTGGCTTTTTTCCTCAGCAAGTGAAAGAATTGTTGCTCGGCTTAGAAAAAGATTATTTAGTCACCTCATAATCCAGGAGATAGCCTTCTTTGACGTTACCCGTACCGGGGAACTTATGAGTAGGCTCTCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCACTGAGTGCCTTATCAACTGCATTTATTGGTCTTGGCTTCATGTTTTGGACGTCATGGAAGTTAACATTGTTGGCTTTAGCTGTTGTTCCTGCTACTTTTATTGCTGCTCGTAAATTCGGTTGGTTCCTATGCGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCTGCTTCAATAGCTGAGGAATCCTTTGGCGCCATAAGGACAGTAAGATCTTTTGCCCAAGAAGAATATGAAATATTACGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGGCTTAAACAAGCTAAAGTTGTGGGACTCTTTTCTGGAGGCATGTACACAGCAACTTCCTTGCCAATTATTATAGTTGTCATCTATGGGGCATATTTGACAACTGCAGGTTCCATGTCCCCCGGTGATCTTACATCCTTTATTCTTTATAGTCTCACAGTGGGACATTCTATATCTGGTCTCTCAGGATTGTATACCATGGCCATGAAAGCTGTGGGTTCAAGCAGAAGGGTGTTTCACCTTATTGATCTTGAATCAACAATGCCAATGTCAGGAAATAAATGTCCTCTGGGAGAACAAGATGGGGAGGTGGAGCTAAATGATGTCTGGTTTGCATATCCATCTCGTCCTAGTCATATGGTACTTAAGGGAATTACAATGAAATTGCAGTCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTACGACCCAACCAAGGGAAAGATCCTGCTGAATGGGGTTTCACTAGTAGAAGTATCACATGAGCATCTGCACAAGAAGATCAGTATTGTGAGTCAAGAGCCTGTACTTTTTAACTGTTCCATTGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTAAATCCTGTTGATATAGAAAATGCAGCAAAAATGGCAAATGCACATGAATTCATATCAAAATTCATAGATAAATACAAGACCCATGTTGGGGAGCGTGGGGTAAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCCAGAGCTCTACTTATGGACCCAAAAATTCTTCTCCTTGATGAAGCCACTAGTGCCCTCGATGCTGAAAGCGAATATTTAGTACAAGGTGCTTTGGACAGACTGATGAAGGGAAGGACAGTTCTAGTCATAGCTCATAGGCTTTCAACTGTGAAGAGTGCTGATAGAGTAGTGGTTGTTTCTGATGGTGAAATTGTGGAGAGTGGGACCCATGAAGAACTTATCAGCAACAACAGTGTCTATTCTGCTCTAATCAGTAGACAGCTCCAAACAACGAAACCTCAATATCTTGTTTCTTAA 1893 0.4168 MGSTSETAPLLERKEEGKSQSGSLNEQTTDLERGEAATNVGFGRVLSLAKPEARKLIFATLALSIASTSEILVPKFGGKVIDIVSGDIQTPEDKAKALEAVKSTILYIFMIVVVGSVSTALDGWLFSSASERIVARLRKRLFSHLIIQEIAFFDVTRTGELMSRLSEDTQIIKNAATTNLSHALSALSTAFIGLGFMFWTSWKLTLLALAVVPATFIAARKFGWFLCELSQKTQDAAAAAASIAEESFGAIRTVRSFAQEEYEILRYSKKVDETLKLGLKQAKVVGLFSGGMYTATSLPIIIVVIYGAYLTTAGSMSPGDLTSFILYSLTVGHSISGLSGLYTMAMKAVGSSRRVFHLIDLESTMPMSGNKCPLGEQDGEVELNDVWFAYPSRPSHMVLKGITMKLQSGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGVSLVEVSHEHLHKKISIVSQEPVLFNCSIEENIAYGFDGKVNPVDIENAAKMANAHEFISKFIDKYKTHVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQGALDRLMKGRTVLVIAHRLSTVKSADRVVVVSDGEIVESGTHEELISNNSVYSALISRQLQTTKPQYLVS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00063 630 Gene3D - 375 624 IPR027417 -
Accr23g00063 630 FunFam ABC transporter B family member 25 108 378 - -
Accr23g00063 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 619 IPR027417 -
Accr23g00063 630 CDD ABC_6TM_AtABCB27_like 59 355 - -
Accr23g00063 630 CDD ABC_MTABC3_MDL1_MDL2 381 619 - -
Accr23g00063 630 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 57 347 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr23g00063 630 Pfam ABC transporter 399 549 IPR003439 GO:0005524
Accr23g00063 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 618 IPR003439 GO:0005524
Accr23g00063 630 Gene3D ABC transporter type 1, transmembrane domain 40 370 IPR036640 GO:0005524|GO:0016020
Accr23g00063 630 SUPERFAMILY ABC transporter transmembrane region 44 361 IPR036640 GO:0005524|GO:0016020
Accr23g00063 630 FunFam ABC transporter B family member 25 379 621 - -
Accr23g00063 630 Pfam ABC transporter transmembrane region 56 330 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr23g00063 630 ProSitePatterns ABC transporters family signature. 521 535 IPR017871 GO:0005524|GO:0016887
Accr23g00063 630 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 26 623 IPR039421 -
Accr23g00063 630 SMART AAA_5 408 595 IPR003593 GO:0016887
Accr23g00063 630 MobiDBLite consensus disorder prediction 1 30 - -
Accr23g00063 630 PIRSF ABC_prm/ATPase_B 3 628 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00063 73 619 Calmodulin-binding Proteins AT2G36910 38.061 3.45e-101 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00063 - - qsa:O6P43_022927 939.488