Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00062 ATGGGCTCAGCAAGTGAAACAGCTCCTCTCTTAGAGCGAAAGGAAGAGGGAAAGAGCGAAAGTGGCTCATTGAATGAACTGACAGACCTTGAACGTGGTGAAGCAGCAACAAATGTGGGATTTGGCAGGGTGCTCTCACTTGCAAAGCCTGAAGCTGGGAAGCTGATTTTCGCAACTCTGGCTCTTTTAATTGCATCCACATCACAAATTTTAATACCAAGATTTGGTGGGAAGATAATTGATATTGTCTCAGGGGATATTCAAACTCCTGAAGATAAAGCTAGAGCTTTGGAAGCAGTCAAGAGCACAATACTGTACATTTTAATGATTGTTGTTGTTGGATCAGTTTCAACAGCACTTAAAGATTGGCTTTTTTCCTCTGCAAGTGAAAGGGTTGTTGCTCGGCTTAGAAAAAGATTATTTAGTCACATCATAATCCAGGAGATAGCCTTCTTTGATGTTACCCGTACTGGGGAACTTATGAGTAGGCTCTCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCACTGAGCGCCTTATCAACTGCATTTATTGGTCTTGGCTTCATGTTTTGGACTTCATGGAAGTTAACATTGTTGGCTTTAGCTGTTGTTCCTGCTACTTTTGTTGCTGCCCGTAAATTTGGTTGGTTCTTGCGCGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCGGCTGCTTCAATAGCAGAGGAATCCTTTGGTGCCATAAGGACAGTAAGATCTTTTGCCCAAGAAGAATATGAAATATTACGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGGCTTAAACAAGCTAAAGTTGTGGGACTCTTTTCTGGAGGCATTAACATAGCAAGTTCCTTGCCAATTATTATAGTTGTCATCTATGGGGCATATTTGACAACTACAGGTTCCATGACCTCTGGTGATCTTACGTCCTTCATTCTTTATAGTCTCACAGTGGGACATTCTATATCTAGTCTCTCAGGATTGTATACCATGGCCATGAAAGCTGTGGGTTCAAGTAGAAGGGTGTTTCACCTTCTTGATCTTGAATCAGCAATGCCAATGTCTGGAAATAAATGTCCTCTGAGAGAACAAGATGAGGTGGAGCTAAATGATGTCTGGTTTGCATATCCATCTCGTCCTAATCATATGATACTTAAGGGAATTACAATGAAATTGCAGTCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTATGACCCAACCAAGGGAAAGATCCTACTGAATGGGGTTCCACTGGGAGAAGTATCACATGAGCATCTGCACAAGAAAATTAGTATTGTGAGTCAAGAGCCTGTACTTTTTAACTGTTCCATTGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTAAATCCTGCTGATATAGAAAATGCAGCAAAAATGGCAAATGCACATGAATTCATATCAAAATTCATAGAGAAATACAAGACCCATGTTGGGGAGCGTGGGGTGAGGCTTTCAGGAGGGCAAAAACAGAGAATAGCAATTGCTAGAGCTCTACTTATGGACCCAAAAATTCTTCTCCTGGATGAAGCCACTAGTGCCCTCGATGCTGAAAGCGAATATTTAGTACAGGATGCTTTGGACAGACTGATGAAGGGAAGGACAGTTCTAGTCATAGCTCATAGGCTATCAACTGTGAAGAGTGCTAATAGAGTAGTGGTTGTTTCTGATGGTGAAATTGTGGAGAGTGGGACCCATGAAGAACTTCTTAGCAACAATGGTATCTATTCTGCTCTAGTCAGTAGACAGCTCCAAACAATGAAACCTCAATATCTTGTTTCTTAG 1887 0.4118 MGSASETAPLLERKEEGKSESGSLNELTDLERGEAATNVGFGRVLSLAKPEAGKLIFATLALLIASTSQILIPRFGGKIIDIVSGDIQTPEDKARALEAVKSTILYILMIVVVGSVSTALKDWLFSSASERVVARLRKRLFSHIIIQEIAFFDVTRTGELMSRLSEDTQIIKNAATTNLSHALSALSTAFIGLGFMFWTSWKLTLLALAVVPATFVAARKFGWFLRELSQKTQDAAAAAASIAEESFGAIRTVRSFAQEEYEILRYSKKVDETLKLGLKQAKVVGLFSGGINIASSLPIIIVVIYGAYLTTTGSMTSGDLTSFILYSLTVGHSISSLSGLYTMAMKAVGSSRRVFHLLDLESAMPMSGNKCPLREQDEVELNDVWFAYPSRPNHMILKGITMKLQSGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGVPLGEVSHEHLHKKISIVSQEPVLFNCSIEENIAYGFDGKVNPADIENAAKMANAHEFISKFIEKYKTHVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDALDRLMKGRTVLVIAHRLSTVKSANRVVVVSDGEIVESGTHEELLSNNGIYSALVSRQLQTMKPQYLVS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00062 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 617 IPR027417 -
Accr23g00062 628 Gene3D ABC transporter type 1, transmembrane domain 39 369 IPR036640 GO:0005524|GO:0016020
Accr23g00062 628 Gene3D - 374 622 IPR027417 -
Accr23g00062 628 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 26 620 IPR039421 -
Accr23g00062 628 Pfam ABC transporter transmembrane region 55 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr23g00062 628 MobiDBLite consensus disorder prediction 1 27 - -
Accr23g00062 628 FunFam ABC transporter B family member 25 377 619 - -
Accr23g00062 628 MobiDBLite consensus disorder prediction 9 27 - -
Accr23g00062 628 PIRSF ABC_prm/ATPase_B 3 626 - -
Accr23g00062 628 CDD ABC_MTABC3_MDL1_MDL2 379 617 - -
Accr23g00062 628 ProSitePatterns ABC transporters family signature. 519 533 IPR017871 GO:0005524|GO:0016887
Accr23g00062 628 SMART AAA_5 406 593 IPR003593 GO:0016887
Accr23g00062 628 SUPERFAMILY ABC transporter transmembrane region 43 360 IPR036640 GO:0005524|GO:0016020
Accr23g00062 628 Pfam ABC transporter 397 547 IPR003439 GO:0005524
Accr23g00062 628 FunFam ABC transporter B family member 25 107 377 - -
Accr23g00062 628 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 56 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr23g00062 628 CDD ABC_6TM_AtABCB27_like 58 354 - -
Accr23g00062 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 379 616 IPR003439 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00062 72 617 Calmodulin-binding Proteins AT2G36910 37.209 4.11e-98 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00062 - - qsa:O6P43_022927 931.784