Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00014 ATGTCAGAGCAAGAAACACAGTCACGGGGCTTCATCTTCATCTGTTTCTTAATTTTCTTTTCAGGTAAAATTGTTGCCCAAGATTTTCTGGACACAGAGAGACAAATTCTTCTACAGCTGAGATCTTATCTAAACAATCAAACTCGAACAGACCGAGGAACATACAAACTCTGGAACACAAACAGCTCAAACCCGTGTCAATGGCCAGGAATCTCATGCAGGCGTCCTACAGGGACAACAACCTCGGCGGCGGCGAGAGTGGTCGGAATAGACCTTTCCGACAGCAGCATCGCTGGCGAGATTTTTAAGAATTTCTCGCAGCTTGCCGAGCTCACTCACCTTGACCTTTCCACAAACACCATCATCGGAGAAATCCCAACGGATCTAAGTCGATGCAGTAACCTGGTATATCTCAATCTCTCCCATAATCTTCTCGAGGGAGAGATTGATTTAACTGGATTGACAAGGTTAGAGACACTAGACTTGTCCCAAAACAGGCTTCATGGTGATATAGGGTCGAATTTTCCTGCCATATGTGACGACTTAGTTACTTTGAATGTTTCTGGGAATAACTTCACTGGTTCCATTGATCATTGTTTCGATCAGTGTTCAAAATTGCAGTACTTGGATTTGAGCACCAACAAGCTCAGTGGAGGTATCTGGATGGGATTTGCGAGGCTGAAGGAGTTTTCAGTTTCAGAGAACTTTATCACTGGGCCTCTCATTGAGAAAGCATTCCCAGAAAATTGTAACCTCGAAGTCCTCGACGTTTCATACAATGGATTTACAGGAATTGCTCAGAAGAATGTCAGTAAATGTAAGAATCTAGCGATTCTGAATCTTTCAAGTAACAAATTTTCTGGGGATATCCCCATTGAATTGGGATCAATCTCAAGCCTGCAAGCTTTGTACTTTGCCAACAATACATTTTCAAGAAACGTGCCAGAGACACTTTCAAACTTGACAAACCTAAATTTCTTGGATTTGAGCGGTAATGGTTTTGGTGGAGAGATACAAGACACACTTGGCAAGCTCAAGCAAGTAAAGTTCCTACTTTTGCATTCAAATGCTTACACTGGAGGATTAAACTCATCAGGCATTCTCAAATTACCCAACATTTCTCGCTTAGACCTTAGTAGCAACAGTTTTTCAGGTTCATTACCTATTGAAATCTCTCAGATGACTGCTTTGAAGTTCTTAATCTTGGCCCATAATCAATTCACTGGAACTATTCCTCACGAGTTTGGAAATTTGGCTCAGCTTCAAGCACTTGATATTTCTTTTAACAATTTAACAGGGCCAATCCCATCAAGCCTGGGAAATTTGGGTTCTCTCTTATGGTTGATGCTTGCCAACAATTCATTGACCGGAGAAATCCCAAAAGAGCTAGGAAATTGCACAAGCTTGCTGTGGCTAAACCTTGGGAACAATAATCTCTCTGGGAATTTCCCTCCTGAATTGACCAAAATTGGAAGAAACTCCATGACCACATTTGAATTGAATCGTAATGAAGTCAATGGAAATATCCCTGCTGGTTCTGTTGAATGTTCTGCAATGAAAAGATGGATTCCTGCAGATTACCCTCCTTTCACCTTTGTGTATAGCATCCTCACAAGGAAAAATTGCATAAGCATTTGGGATAGATTACTTAAAGGGTATGGAATTTTCCCAATTTGTTCATCTGGGTCATTTTTTCGATTGAAGGAGATCTCTGGGTATGTTCAGTTAAGTGGGAATAATCTCATCGGAGAAGTTCCTTCAGAAATTGGGAACATGCAAAATTTCAGCATGCTGCATTTAGGGTTGAACAAATTTTCTGGGGAAATCCCTGCGGTGATGGGAGATCTGCCACTTGTGGTGTTGAACATAACAAGAAACAATTTTTCAGGTGAGATTCCGTGGGACATTGGAAACCTTGAATGTCTTAGGAATCTGGATTTGTCCTACAACAATTTCTCTGGGACATTCCCTACAAGCTTGAACAACTTGACAGAGCTCAGTAAATTCAACATCTCTTACAATCCCTTAATTTCTGGGACAATCCCACCAACAGGACAATTAGCCACATTTGATGAAGATTCGTATCTGGGAGACCCACGTTTGACTCTACCCAGCTTCATCCGTAACGTCTCAGACGACCCCAAAAAAAACACAACCGCTCATAGAGACCACAAAATTAAAAACAGAAACCCCACGAAACTGTCAATGTTCTTGGCGTTTCTTGCTATGACACTTGCTCTGTTGGTATTCGGGCTAATCTCTTTCATAGTATGTTCATTAGCAAAAGCACGTCCACATGACCCAGAAGGATGCCTATTGGAAGACACAAAAAGTCAGCAAGATTCCGACAATACATCACCATGGTCGTCCGACCAAATTAAGGTTATCCACTTGAACAAGATCGCATTCACGCACGCCGACATTATCCAAGCCACCGGAAACTTCTCTGAAAACAGAGTCATCGGAAAAGGCGGTTTTGGAACCGTGTACAGAGGAATCTTCCCGGACGGAATAGAAGTAGCAGTGAAGAAGCTTCAAAGAGAAGGACTCGAAGGAGAAAGGGAGTTCAGAGCAGAAATGGAAGTTCTGAGCGGAAACGGGTTCGGGTGGCCCCACCCGAATTTAGTGACCCTATACGGATGGTGCCTAAACGGGTCGGATAAAATCCTGGTTTATGAATACATGGAAGGAGGAAGCTTGGAAGATTTTGTTACAGACAGAACAAGACTCACGTGGAAAAGAAGGTTAGAGATCGCCATTGATGTGGCTCGAGCTTTGGTTTATTTGCACCATGAATGTTTCCCGCCAATTGTTCACAGAGACGTGAAGGCTAGCAACGTGCTCTTGGATAAACATGGGAAGGCCAAAGTTACAGACTTTGGCCTAGCAAGAGTGGTGGAAAACGGAGTGAGTCACGTGACCACCATGGTCGCGGGCACGGTGGGCTACGTGGCACCGGAGTATGGTCAGACATGGAAGGCGACAACCAAAGGCGATGTGTACAGCTTTGGAGTGTTGGCTATGGAGTTAGCCACCGGAAGGAAGGCGGTGGACGGTGGTGAGGAGTGCTTGTTGGATTGGGCTAGACGGGTCACGGGCTATGGATATGGTCTGACCCGACCCATGATACCAGTGTTGTTGATGGGCTCTGGGCTCGGAGAGGGGTCGGAGGATATGGGTGAGTTGTTACGGATTGGTATAAAGTGTACGGCGGAGGCACCGCAAGCAAGGCCCAACATGAAGGAGGTCTTGTCTATGCTGGTTAAAATATTGTACCCAAAAGGGGAGTGA 3291 0.4412 MSEQETQSRGFIFICFLIFFSGKIVAQDFLDTERQILLQLRSYLNNQTRTDRGTYKLWNTNSSNPCQWPGISCRRPTGTTTSAAARVVGIDLSDSSIAGEIFKNFSQLAELTHLDLSTNTIIGEIPTDLSRCSNLVYLNLSHNLLEGEIDLTGLTRLETLDLSQNRLHGDIGSNFPAICDDLVTLNVSGNNFTGSIDHCFDQCSKLQYLDLSTNKLSGGIWMGFARLKEFSVSENFITGPLIEKAFPENCNLEVLDVSYNGFTGIAQKNVSKCKNLAILNLSSNKFSGDIPIELGSISSLQALYFANNTFSRNVPETLSNLTNLNFLDLSGNGFGGEIQDTLGKLKQVKFLLLHSNAYTGGLNSSGILKLPNISRLDLSSNSFSGSLPIEISQMTALKFLILAHNQFTGTIPHEFGNLAQLQALDISFNNLTGPIPSSLGNLGSLLWLMLANNSLTGEIPKELGNCTSLLWLNLGNNNLSGNFPPELTKIGRNSMTTFELNRNEVNGNIPAGSVECSAMKRWIPADYPPFTFVYSILTRKNCISIWDRLLKGYGIFPICSSGSFFRLKEISGYVQLSGNNLIGEVPSEIGNMQNFSMLHLGLNKFSGEIPAVMGDLPLVVLNITRNNFSGEIPWDIGNLECLRNLDLSYNNFSGTFPTSLNNLTELSKFNISYNPLISGTIPPTGQLATFDEDSYLGDPRLTLPSFIRNVSDDPKKNTTAHRDHKIKNRNPTKLSMFLAFLAMTLALLVFGLISFIVCSLAKARPHDPEGCLLEDTKSQQDSDNTSPWSSDQIKVIHLNKIAFTHADIIQATGNFSENRVIGKGGFGTVYRGIFPDGIEVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLNGSDKILVYEYMEGGSLEDFVTDRTRLTWKRRLEIAIDVARALVYLHHECFPPIVHRDVKASNVLLDKHGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGQTWKATTKGDVYSFGVLAMELATGRKAVDGGEECLLDWARRVTGYGYGLTRPMIPVLLMGSGLGEGSEDMGELLRIGIKCTAEAPQARPNMKEVLSMLVKILYPKGE 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00014 1096 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 293 1089 - -
Accr23g00014 1096 Gene3D Ribonuclease Inhibitor 554 719 IPR032675 -
Accr23g00014 1096 FunFam Leucine-rich repeat receptor-like protein kinase 895 1095 - -
Accr23g00014 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 937 949 IPR008271 GO:0004672|GO:0006468
Accr23g00014 1096 Gene3D Ribonuclease Inhibitor 247 336 IPR032675 -
Accr23g00014 1096 Gene3D Ribonuclease Inhibitor 153 246 IPR032675 -
Accr23g00014 1096 Pfam Protein kinase domain 816 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr23g00014 1096 Pfam Leucine rich repeat 251 308 IPR001611 GO:0005515
Accr23g00014 1096 Pfam Leucine rich repeat 156 216 IPR001611 GO:0005515
Accr23g00014 1096 Pfam Leucine rich repeat 420 479 IPR001611 GO:0005515
Accr23g00014 1096 SUPERFAMILY RNI-like 90 359 - -
Accr23g00014 1096 ProSitePatterns Protein kinases ATP-binding region signature. 821 844 IPR017441 GO:0005524
Accr23g00014 1096 Gene3D Ribonuclease Inhibitor 435 522 IPR032675 -
Accr23g00014 1096 SMART LRR_typ_2 321 345 IPR003591 -
Accr23g00014 1096 SMART LRR_typ_2 442 466 IPR003591 -
Accr23g00014 1096 SMART LRR_typ_2 154 181 IPR003591 -
Accr23g00014 1096 SMART LRR_typ_2 418 441 IPR003591 -
Accr23g00014 1096 SMART LRR_typ_2 370 394 IPR003591 -
Accr23g00014 1096 SMART LRR_typ_2 108 132 IPR003591 -
Accr23g00014 1096 SMART LRR_typ_2 639 663 IPR003591 -
Accr23g00014 1096 Gene3D Transferase(Phosphotransferase) domain 1 895 1094 - -
Accr23g00014 1096 Gene3D Phosphorylase Kinase; domain 1 776 894 - -
Accr23g00014 1096 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
Accr23g00014 1096 SUPERFAMILY Protein kinase-like (PK-like) 789 1088 IPR011009 -
Accr23g00014 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 345 507 - -
Accr23g00014 1096 FunFam Leucine-rich repeat receptor protein kinase MSP1 777 894 - -
Accr23g00014 1096 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Accr23g00014 1096 ProSiteProfiles Protein kinase domain profile. 815 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr23g00014 1096 SMART serkin_6 815 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr23g00014 1096 Gene3D Ribonuclease Inhibitor 31 152 IPR032675 -
Accr23g00014 1096 SUPERFAMILY L domain-like 315 677 - -
Accr23g00014 1096 CDD STKc_IRAK 821 1090 - -
Accr23g00014 1096 Gene3D Ribonuclease Inhibitor 337 434 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00014 47 604 Receptor kinase-like Gene Family AT5G07280 30.288 2.21e-51 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Accr23g00014 Pkinase 8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00014 - - vum:124845100 1454.11