Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00011 ATGGGTTGTGTGAATGCGAAGCAGGCCGTGTCGGTGACGCCTGCAATTGACCACTCCGGTGTGTTTCGTGGCAATGCGGGTACGGGAAATTCGGGGAGGAATTTAGGGGAGTCTGACAACAAGAAGAAGAAGAGTGAGTCAGTGGGGCTGAGTAGAAGCGAGGTAGGTGAGTTGAGAAGGGCGGGTTCAAATGGAGGTTGTGATTCGTATAGTTTCAGATTGGGGAATCTGCAAAAGTATGTAGAAGGAGAGCAAGTAGCAGCGGGTTGGCCGGGTTGGCTTACTGCCGTCGCCGGTGAAGCCATTCAGGGCTGGGTGCCACTCCAAGCTGATGCGTTTGAGAAACTTGAGAAGATCGGACAAGGAACATATAGCAGTGTCTTCCGAGCGAGAGAACTTGAGACGGGGAAGATAGTGGCTCTGAAGAAGGTACGGTTTGACAACTTTGAGCCCGAAAGCGTCAGGTTCATGGCTCGAGAAATTATGATTCTCCGAAGGCTTAATCATCCAAACATTATAAAATTGGAGGGCTTGATTACTTCCAAGTTGTCATGTAGCATATATCTTGTATTCGAGTATATGGAACATGACATTACAGGGCTCTTATCTTCCCCTGATATCAAGTTTAGTGAAGCGCAGATTAAATGCTACATGAAGCAGTTGTTATCTGGACTTGACCATTGTCATTCACGTGGTGTAATGCACCGTGACATCAAGGGATCTAATCTTCTAGTGAATAATGATGGGATACTAAAGGTAGCTGATTTTGGACTGGCGAACTTCTCAAATCCTGGGCACAAACAGCCCCTCACTAGTCGTGTAATTACGTTGTGGTACCGTCCTCCTGAACTTTTACTGGGTTCAACTGACTATGGTCCTTCTGTGGATCTTTGGAGCATTGGCTGCGTATTTGCTGAACTACTTGTCGGGAAGCCTATCCTTCAGGGGAGAACAGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCTCCACCTGAAGAATACTGGAAAAAGTCTAGACTCCCTCATGCAACGTTGTTTAGGCCACAGCAACCATATAGTAGTTGTCTCCGAGAGACCTTTAAAGATTTGCCTCCAACTAGTGTGAACTTGCTACAGACTCTTCTTTCTGTCGAACCATACAAACGTGGAACTGCCTCCTCTGCTCTCTCATCTGAGTATTTCAAAACAAAGCCATATGCTTGTGAACCATCAAGCCTGCCGATATACCCACCTAGCAAGGAGATTGATGTGAAACAGCGGGAGGAGTCAAGGAGGAAAAAGATTGGTGGAAGAGCACGTGGACCTGAAACAAGAAAACCATCAAGAAAGCCATTAGGATTCAACAAATTAGTTCCAACAGAGGATTTGGCAAGTCAAACCCAGAAATTCCAAAGGGTAAATGGCAGGTCAGTCCACATCCTTAAAGAAGGGAGCACCAATGTAGGTAAGGAGGAACCAAAGCTGTCTAGTGATAAACCCGATGATGCTTCTCATACCAAGAATGCATCTCAAGGAGATATTCCCTTTTCTGGGCCGTTGCAAGTTTCCACATCAAGTGGCTTTGCATGGGCAAAAAGACGTAAAGATGACATTTCAATAAGATCCCACTGTCGATCTATTTCAAGGGGGCATATTGTCAATCCATTAGAGTCTTCTGTACCAAATTCAATGAATAACTTTGATTCTAGAAGCATGGAAAATAAGGATTGTCTGGCCCGCTCCAACTCTCGGAGCCATGAGCCACTTGAAATCCCTAAGCTTGCCATGCAAAACCAATGGAGCAAGTTTGATCGCCCTGATTCTTTTGATGCTTCTGACGAATACCACTCACAAGAGCTATCTATGGCACTTTATCATAGGGAGGATTCAATATCCAAGAGAAGTAACATGAGTTATCAGGATCATGGAGAGAAGGTTGAGTTTTCGGGACCCCTGCTATCTCAAATGCATACTGTTGATGAGCTCTTAGAAAAACATGAGCGCCACATCCGTCGAACAGTCCGAAGATCTTGGTTTCAAAGAGTTGGGACAGGTAAGAAGCAAGGGAAGCAAGTATAA 2067 0.4523 MGCVNAKQAVSVTPAIDHSGVFRGNAGTGNSGRNLGESDNKKKKSESVGLSRSEVGELRRAGSNGGCDSYSFRLGNLQKYVEGEQVAAGWPGWLTAVAGEAIQGWVPLQADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREIMILRRLNHPNIIKLEGLITSKLSCSIYLVFEYMEHDITGLLSSPDIKFSEAQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNDGILKVADFGLANFSNPGHKQPLTSRVITLWYRPPELLLGSTDYGPSVDLWSIGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPEEYWKKSRLPHATLFRPQQPYSSCLRETFKDLPPTSVNLLQTLLSVEPYKRGTASSALSSEYFKTKPYACEPSSLPIYPPSKEIDVKQREESRRKKIGGRARGPETRKPSRKPLGFNKLVPTEDLASQTQKFQRVNGRSVHILKEGSTNVGKEEPKLSSDKPDDASHTKNASQGDIPFSGPLQVSTSSGFAWAKRRKDDISIRSHCRSISRGHIVNPLESSVPNSMNNFDSRSMENKDCLARSNSRSHEPLEIPKLAMQNQWSKFDRPDSFDASDEYHSQELSMALYHREDSISKRSNMSYQDHGEKVEFSGPLLSQMHTVDELLEKHERHIRRTVRRSWFQRVGTGKKQGKQV 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00011 688 MobiDBLite consensus disorder prediction 413 516 - -
Accr23g00011 688 MobiDBLite consensus disorder prediction 456 470 - -
Accr23g00011 688 PANTHER CELL DIVISION PROTEIN KINASE 111 401 - -
Accr23g00011 688 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Accr23g00011 688 SMART serkin_6 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr23g00011 688 MobiDBLite consensus disorder prediction 21 63 - -
Accr23g00011 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Accr23g00011 688 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Accr23g00011 688 CDD STKc_CDK9_like 113 397 - -
Accr23g00011 688 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr23g00011 688 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr23g00011 688 FunFam probable serine/threonine-protein kinase At1g54610 196 436 - -
Accr23g00011 688 MobiDBLite consensus disorder prediction 417 446 - -
Accr23g00011 688 SUPERFAMILY Protein kinase-like (PK-like) 107 402 IPR011009 -
Accr23g00011 688 FunFam probable serine/threonine-protein kinase At1g54610 100 195 - -
Accr23g00011 688 Gene3D Transferase(Phosphotransferase) domain 1 196 436 - -
Accr23g00011 688 MobiDBLite consensus disorder prediction 36 50 - -
Accr23g00011 688 MobiDBLite consensus disorder prediction 481 502 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00011 105 457 Core Cell Cycle Gene Families AT5G10270 48.509 2.91e-113 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr23g00011 Pkinase 3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00011 - - gmx:100803328 1115.14