Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr23g00010 | ATGCTGGTGAAAATTGATATCCAATGTCGTGTTCAAGGGGACGTGGTTCTTGAGTGCATACATACGGATGATGACTTCAGTCATGAGGAGATGATTTTTAGTGTTATGTTTCTCACAGCATTTGTGCGTTCAAACATATTGGTGCTCAACCGCGATGAGGTTGATATTTTGTGGGATTCTAAGGATCAATTTCCCAGGGATTTTAACATTGAGGTACTTTTTTTGGATGCCGATGCTGTTATGCCTAATCTTACCAGCTACCACAGTCAGGGCAAGTGA | 279 | 0.4158 | MLVKIDIQCRVQGDVVLECIHTDDDFSHEEMIFSVMFLTAFVRSNILVLNRDEVDILWDSKDQFPRDFNIEVLFLDADAVMPNLTSYHSQGK | 92 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr23g00010 | 92 | ProSiteProfiles | C2 tensin-type domain profile. | 1 | 77 | IPR014020 | - | |
| Accr23g00010 | 92 | SMART | PTEN_C2_2 | 1 | 76 | IPR014020 | - | |
| Accr23g00010 | 92 | PANTHER | FORMIN-J | 1 | 86 | - | - | |
| Accr23g00010 | 92 | Pfam | C2 domain of PTEN tumour-suppressor protein | 1 | 74 | IPR014020 | - | |
| Accr23g00010 | 92 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 74 | IPR035892 | - | |
| Accr23g00010 | 92 | Gene3D | - | 1 | 80 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr23g00010 | 1 | 86 | FH2 protein (formin) Gene Family | AT5G07740 | 69.767 | 6.10e-39 | 135 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr23g00010 | - | - | pcin:129307727 | 157.147 |