Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00001 ATGGAGATTGGAGGCTTTGATTTGAACAAAGTATGTGCTAATGCTGGAAATCCTAGCAAGAGGACTGATGATTTCATTGATAGAAGCAAGGTGAAAATATTGTTGTGCGATAACGATACCAAGAGTTCGGAAGAGGTTTTAACGCTTCTTTCCGGATGTTCTTATCAAGTTACTTCAGTAAGTTCGCCAAGGCAGGCAATTGATGTACTGAATGCAGAGGCGCAAGATATTGATATCATACTTGCTGAAGTTGGCATGAAGATGTTGAAGTACATTGCACGAAAAAAAGATTTGCATCGAATTCCTGTTATAATCATGTCGGCACACGATGAAGTATCCATTGTTATGAAGTGTTTGAGACTTGGAGCAGCAGAGTATCTAATAAAGCCTTTACGCTCTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCACATGCTTGGTCTGACAGAGAAGAACATGAAGACCTATAATTCCGATCTGGCAGCATCAGACCCTGGAGATGGTAATGGTAATACAGCCAGTACCGCCTTTTTCTCAGATGATACAGAAGACAAGTCCAACAGAAGCACTAATCCAGAGATAGGAATGTCAATCGAGCAGCAAAATGAGTCTACAGCTGCTGCTGCTGCTCCTCCTGAGGAGCCTCCAGGTGCTCATGCATCAGAGTATGGGCCTGATGTGCCTGGAACTAGTGATCGCCAGACAAGACACCGTTCTTCAGGACCAAAGAAGAGTGGACTGAGGATCGGGGAGTCATCGGCGTTCTTTAGTTATGTTAAAACAACCATGCAAAAGAGCAACTTACAAGGGATTCCTCAAGTTCAAAACAATGCTGCAACACAACTAAGGATGGAAGACATGCATCAAACTTGTCCCTATGGGGTTCATAACCTTAAAACACATGGAAATGGAGAGCCAAGTGAGAGACCTAATAAAGATGATTTACCCAGCAGCATTAGTAAACCTGATTCTTTCTCCACTGACAATTCTTCTGCTCCACCTGCATCCATGGGAAGTCTAAATCAAAAGAACTTCAATCAAGAACATTTACCACAAGATGTCACCCATGTTAAAAATGGAACTCATATTTCTGAGACTCAATTACCCGGTACTCCTTCCCAACATCCTCATTTATATTATATTTCAGGGTTCTTCAATCCCCCTCTGATGCCATCCTCAGCGCCATTGTATCCTAAGAATCATCAGGACCCGCAGAATCATGCTAGTATGATTGCAAGGTACAGTGACATTTCCCATCGTCCTCCTGATGCGAATGGGATGACTTACTTCCCATATCACCCAATGACTGTATGCTTACAACCTGGTCAGATGTCCTCAGCTCATTCACGGCCATCATTTGGAAGTTCAAGTTCATCCAAAGCAAAACTAAATATAGTTGATAGGAGAGCAGAAGCATTGATGAGGTTTAGAAAGAAAAGGAAAGAACGATGCTTTGATAAGAAAATTAGGTATGTCAATCGAAAGCAGCTTGCTGAAAGGCGACCTCGCGTGAGGGGACAGTTTGTGAAAAAGTTGAATGGAGTCAATGTTCATCTCAATGGACAACCTGCTTCCATTAAATATGATGAAGAGGAGGAGGACGACTAA 1620 0.4235 MEIGGFDLNKVCANAGNPSKRTDDFIDRSKVKILLCDNDTKSSEEVLTLLSGCSYQVTSVSSPRQAIDVLNAEAQDIDIILAEVGMKMLKYIARKKDLHRIPVIIMSAHDEVSIVMKCLRLGAAEYLIKPLRSNELLNLWTHMWRRRHMLGLTEKNMKTYNSDLAASDPGDGNGNTASTAFFSDDTEDKSNRSTNPEIGMSIEQQNESTAAAAAPPEEPPGAHASEYGPDVPGTSDRQTRHRSSGPKKSGLRIGESSAFFSYVKTTMQKSNLQGIPQVQNNAATQLRMEDMHQTCPYGVHNLKTHGNGEPSERPNKDDLPSSISKPDSFSTDNSSAPPASMGSLNQKNFNQEHLPQDVTHVKNGTHISETQLPGTPSQHPHLYYISGFFNPPLMPSSAPLYPKNHQDPQNHASMIARYSDISHRPPDANGMTYFPYHPMTVCLQPGQMSSAHSRPSFGSSSSSKAKLNIVDRRAEALMRFRKKRKERCFDKKIRYVNRKQLAERRPRVRGQFVKKLNGVNVHLNGQPASIKYDEEEEDD 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00001 539 MobiDBLite consensus disorder prediction 321 346 - -
Accr23g00001 539 Pfam CCT motif 473 515 IPR010402 GO:0005515
Accr23g00001 539 MobiDBLite consensus disorder prediction 193 211 - -
Accr23g00001 539 MobiDBLite consensus disorder prediction 163 252 - -
Accr23g00001 539 SUPERFAMILY CheY-like 29 150 IPR011006 -
Accr23g00001 539 MobiDBLite consensus disorder prediction 297 346 - -
Accr23g00001 539 ProSiteProfiles CCT domain profile. 473 515 IPR010402 GO:0005515
Accr23g00001 539 SMART REC_2 31 140 IPR001789 GO:0000160
Accr23g00001 539 Gene3D - 31 220 - -
Accr23g00001 539 ProSiteProfiles Response regulatory domain profile. 32 144 IPR001789 GO:0000160
Accr23g00001 539 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 268 IPR045279 GO:0009736
Accr23g00001 539 MobiDBLite consensus disorder prediction 306 320 - -
Accr23g00001 539 MobiDBLite consensus disorder prediction 163 184 - -
Accr23g00001 539 Pfam Response regulator receiver domain 33 138 IPR001789 GO:0000160
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00001 6 534 Response Regulator Gene Family AT5G61380 43.291 2.48e-139 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr23g00001 Response_reg 1.2e-12 CL0304