Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00127 ATGGGTAGGGTTCCATGCTGTGAGGAGAATAGTGGAGTGAAGAAAGGGCCATGGACAGCAGAAGAAGATGAGAAGCTTATGGAATATATCAGCAAGCAAGGCCATGGAAGTTGGAGGACACTTCCAAAGAAAGCTGGTCTTAATAGGTGTGGCAAAAGCTGCAGGCTGAGGTGGACTAATTATCTGAGGCCTGATATTAAGAGAGGTAAATTCTCTGAAGAAGAAGACCGTATCATCATCAACCTTCACTCTGGTCTGGGAAACAAGTGGTCAAAGATTGCAGGGCATCTTCCTGGAAGAACAGATAATGAAATAAAGAACTACTGGAACACCCATATAAGGAAGAAGCTGCTTCAGATGGGAATTGACCCAGAAACTCACAAACCCAGAACTGACTTCAATCACCTCCTCAATAATCTCTCTCACTTGCTTGGAATCCCTTCATCGTCATCAAATAATATGGGTCTATTATGGGGCAACATCAACAATCCTCTGGTGGCATCTTCACAACTAGATTTCACTGCTCAGCTTACCAAAATCCAACTTCTCCAAAACCTATTACAAATTGTTGATTCAAACCCTTGCCTCTTAGGCAATAATATTAAAAACCATACCCTCAACCCACTTCAAATTCAATCCTTTATGAATGGGACTAATGGTCTATTATTCCTTACTCAAGCACAAGGAGGATCTGGTTTAGAAGGTTTTAGTTTGAATAATGGTAGCGATAATATTTATAATATTATTCCACATCATCAGAGCCATCATCAGTCAGACATGACAATACCTGCTCTAGTCTCCGCGTCTCCTGTGACCGGCTCGGCGGTGAAGCGAACTGACGGTAGTAGCTGCAATGCAGCTCCAGCGTCGTCCACTGATCAGTCACCTAATAATAATTGCTCTTCAGTATTGTTTGAGAGTTGGGAGAATTTCCTGGATGAGGAAATGATGACTGGTTCTGACTGGAAGGAGATTCTTGAATTATCGTCAACTTTGGCGCCTCCAACCTCGTGGTAG 1017 0.4277 MGRVPCCEENSGVKKGPWTAEEDEKLMEYISKQGHGSWRTLPKKAGLNRCGKSCRLRWTNYLRPDIKRGKFSEEEDRIIINLHSGLGNKWSKIAGHLPGRTDNEIKNYWNTHIRKKLLQMGIDPETHKPRTDFNHLLNNLSHLLGIPSSSSNNMGLLWGNINNPLVASSQLDFTAQLTKIQLLQNLLQIVDSNPCLLGNNIKNHTLNPLQIQSFMNGTNGLLFLTQAQGGSGLEGFSLNNGSDNIYNIIPHHQSHHQSDMTIPALVSASPVTGSAVKRTDGSSCNAAPASSTDQSPNNNCSSVLFESWENFLDEEMMTGSDWKEILELSSTLAPPTSW 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00127 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 257 - -
Accr22g00127 338 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Accr22g00127 338 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Accr22g00127 338 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Accr22g00127 338 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Accr22g00127 338 FunFam Transcription factor MYB39 70 131 - -
Accr22g00127 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Accr22g00127 338 SMART sant 14 64 IPR001005 -
Accr22g00127 338 SMART sant 67 115 IPR001005 -
Accr22g00127 338 Gene3D - 69 135 - -
Accr22g00127 338 Gene3D - 14 67 - -
Accr22g00127 338 MobiDBLite consensus disorder prediction 274 299 - -
Accr22g00127 338 FunFam MYB-related transcription factor 14 67 - -
Accr22g00127 338 CDD SANT 70 113 IPR001005 -
Accr22g00127 338 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Accr22g00127 338 CDD SANT 17 62 IPR001005 -
Accr22g00127 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00127 1 327 MYB Transcription Factor Family AT5G16770 47.965 1.71e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr22g00127 Myb_DNA-binding 9.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00127 K09422 - gmx:778082 336.65