Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00126 ATGTCAGATCGGAGTACATTATCCGGCGTTGTCGTCTCGCCGGAGGAGGGAAAGAAGAAGGAAGAGGGAGGGAAAAATAAGGAGAGAAAAGTTCCTTTGTTGAAGTTGTTCTCTTTCGCTGATTCCTATGACTTTGTGCTAATGACCATTGGATCTATCGGTGCATGTGTTCATGGTGCTTCTGTTCCTGTTTTCTTCATTTTCTTCGGAAAGTTAATCAATGTCATAGGTCTCCCTTCCCTCTTTCCCCAACAAGCTTCTCACCAAGTTGCCAAGTATTCGTTGGATTTTCTGTATCTGAGTATAGTAATCTTGTTTTCGTCTTGGACAGAGGTGGCATGTTGGATGCATAGTGGCCAACGACAAACAGCGAAGATGAGAATGGCATATTTAAGATCAATGTTAAATCAAGACATAAGTTTGTTTGATACAGAAGCTTCAACTGGGGAGGTCATTTCTGCAATTTCCAGCGAGATTCTGGTTGTTCAAGATGCTCTCTCTGAGAAGGTGGGAAAGTTCTTGCACCACATAAGCCGATTCATAGCGGGATTTATCGTTGGGTTTGCTGGAATATGGCAGATCAGTCTGGTCACACTTGCGATTGTTCCCATGATTGCCCTCGCCGGAGGTCTTTACGCTTATGTCAGCTTCGGCCTCATTGCCGAAGTCCAAAAAGCCTACGTTAGGGCTGGTGAAATCGCCGAAGAGGTGATAGGGAATGTCCGTACGGTTCAGGCATTTGTAGGAGAAGAGAGAGCGGTGAGATCATACAAAGCGGCTCTCGTGAAAACTTACAAGAATGGCCAGAAAGCAGGTTTAGCAAAGGGTCTTGGACTAGGCTCCATGCATTGTGTCCTGTTTCTGTCATGGGCCCTGCTTGTTTGGTTCACTAGTGTCATTGTTCACAAGAAAATCGCCAGTGGAGGCGAGTCTTTTACTACCATGATCAATGTTGTAGTCTCTGGCTTGTCGCTTGGTCAGGCAGCACCGGATATATCTGCATTCATCCGAGCTAAGGCAGCAGCCTATCCCATTTTTGAGATGATTGAAAGGGAAACAGTGAACAAAAGCAGCTCAAAAACTGGTCGCATGTTAAGTAAATTGGATGGTCGCATTCAATTTAAAGATGTCTGTTTCAGTTATCCATCTCGTCCTGATATAGCTGTTTTCAACAAACTCTATCTTGACATTCCACCTGCCAAAGTTGTAGCCTTGGTAGGAGGAAGTGGGTCAGGAAAGAGCACTATGATATCCCTAATTGAGCGCTTCTACGAGCCCCTTTCTGGACAAATACTGTTAGATGGGAATGATATCCAAGAACTCGATCTTAAATGGCTAAGAAGTCAAATTGGGCTGGTTAATCAAGAACCTGCCCTTTTTACTACAGGCATTAGGGAAAATATACTGTATGGAAAGAATGATGCCACACTTGAAGAACTTAAACATGCTGTGAAGCTTTCAGATGCTGAGTCTTTCATTAACAATCTTCCCGAAGGATTGGAAACACAGGTTGGTGAGAGAGGGATACAACTTTCAGGTGGACAAAAACAAAGGATTGCAATATCTCGAGCCATTTTGAAGAACCCATCAATCCTTTTATTGGATGAAGCTACCAGTGCTCTGGACGTGGAATCTGAGAAGAGTGTACAGGAAGCTCTTGATCGTGTCATGGTTGGTAGAACAACTGTCATAGTGGCACACAGACTTTCTACAATTAGGAATGCAGATATGATTGCTGTTGTTCAGGGAGGGAGAATTGTAGAAATTAATAACCATGAGGAGCTCATTTCTAACCCAAATAGTGTATATGCATCTCTCGTTCAACTCCAGGAGAAAGCTTCTTTGCAAAGCCACCAGCCAGAGGGTCCTACTCCTTGCATCGCACCAAGGTACTCAAGAGAATTGTCCTGTACAACAAGCCTTGATGGCAGTTTTCGGTCAGATAAAGAGTCTTTAGGCCGTGTTTGTACTGATGAAGTGGAAAGTGTAGCAAAGTCAGGTCATGTTTCTGTGAAAAGACTGTATTCAATGATTGCACCTGACAGGTTTTATGGGGTTTTTGGCACCTTTTGTGCATTTATTGCCGGAGCTCAAATGCCACTTTTTGCTCTTGGAATTTCTCATGCGCTTGTATCATACTATATGGACTGGGATACAACACGTCATGAGGTTAAAAGAATCACTTTTCTATTCTGTGGGGCGGCAATAGTGACTGTTATTGTCCATGCCATTGAGCATCTTTCTTTTGGAATCATGGGCGAGAGACTTACTCTTCGTGTGCGAGAAATGATGTTTTCTGCTATTTTGAAAAATGAAATTGGCTGGTTTGATGATACAAACAACACGAGTTCAATGCTATCATCACGTTTAGATATGGATGCAACTTTATTCCGAACTATAGTTGTTGATCGGTCTACGGTTCTCTTACAGAATGTTGGTCTGGTTGTTGCTTCATTTATTATTGCCTTCATGTTGAACTGGAGATTAACACTAGTTGTCTTGGCCACATACCCTTTGATCATCAGTGGTCACATCAGCGAGAAACTTTTCATGAAAGGCTTTGGTGGCAACTTGAGCACGGCGTATCATAAAGCCAACATGCTGGCTGGAGAAGCTGTCAGTAACATACGTACTGTTGCTGCATTTTGCTCTGAAGAAAAGGTCCTAAAACTTTATGCTAATGCGCTTGCCGAGCCTTCTAAGCTTTCGTTTAAACGGGGACAAATTTCAGGCATATTCTATGGCATTTCGCAGTTCTTCATTTTCTCTTTTTATGGCCTTGCCTTGTGGTATGGTTCTGTTTTGATGGGAAAGGAGCTGGCTAGCTTCGAATCCGTCATGAAGACATTTATGGTTCTAATTGTAACTGCATTTGGCATGGGGGAGGCGTTGGCACTGGCTCCAGACCTTTTGAAAGGGAACCAAATGGTTGCTTCAGTTTTTGAAGTGATGGATAGAAAGCCAGGAATGATGGCCGATGCCGGAGAAGAGCTTAAGATGGTGGAGGGAACAATTGAGCTAAAAGGCATCCATTTCAGTTACCCATCAAGGCCTGATGTGGTGATTTTTAAAGATTTTAATCTGAAAGTGCCTTCAGGCAAGAGTATTGCCTTAGTGGGACAAAGTGGTTCTGGTAAAAGCTCTGTCATCTCTCTTATACTCAGATTTTATGATCCATCGTCTGGGAGAGTGATGATTGATGGAAAAGACATTAGGAGACTCCATTTGAAGTCTCTGAGGAAGCATATTGGTCTTGTGCAACAAGAACCTGCGCTTTTTGCAACATCAATCCATGAAAACATTCTGTATGGAAAGGAAGGAGCTTCTGACTCAGAGGTAATTGAAGCAGCTAAGCTTGCCGATGCTCACAGTTTCATCAGTTCTCTCCCGGACGGCTACAGCACCAAAGTGGGCGAACGAGGCGTACAACTCTCTGGTGGCCAGAGACAAAGAGTAGCCATAGCCAGAGCTGTTCTAAAGAATCCAGAAATCTTGCTACTAGATGAAGCCACTAGTGCACTTGATGTTGAATCTGAGCATGTGGTGCAGCAAGCTCTGGACAGATTGATGAAGAACAGGACAACAGTTATGGTGGCACACAGGCTATCAACAATAAGAAATGCAGATCAAATCTCAGTTCTACACAACGGTAAGATAATAGAGCAAGGGACTCATTCAAGTCTCAGAGAAAACAAAAATGGAGCATATTTCAAATTAGTCAATCTTCAATAA 3732 0.4317 MSDRSTLSGVVVSPEEGKKKEEGGKNKERKVPLLKLFSFADSYDFVLMTIGSIGACVHGASVPVFFIFFGKLINVIGLPSLFPQQASHQVAKYSLDFLYLSIVILFSSWTEVACWMHSGQRQTAKMRMAYLRSMLNQDISLFDTEASTGEVISAISSEILVVQDALSEKVGKFLHHISRFIAGFIVGFAGIWQISLVTLAIVPMIALAGGLYAYVSFGLIAEVQKAYVRAGEIAEEVIGNVRTVQAFVGEERAVRSYKAALVKTYKNGQKAGLAKGLGLGSMHCVLFLSWALLVWFTSVIVHKKIASGGESFTTMINVVVSGLSLGQAAPDISAFIRAKAAAYPIFEMIERETVNKSSSKTGRMLSKLDGRIQFKDVCFSYPSRPDIAVFNKLYLDIPPAKVVALVGGSGSGKSTMISLIERFYEPLSGQILLDGNDIQELDLKWLRSQIGLVNQEPALFTTGIRENILYGKNDATLEELKHAVKLSDAESFINNLPEGLETQVGERGIQLSGGQKQRIAISRAILKNPSILLLDEATSALDVESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADMIAVVQGGRIVEINNHEELISNPNSVYASLVQLQEKASLQSHQPEGPTPCIAPRYSRELSCTTSLDGSFRSDKESLGRVCTDEVESVAKSGHVSVKRLYSMIAPDRFYGVFGTFCAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKRITFLFCGAAIVTVIVHAIEHLSFGIMGERLTLRVREMMFSAILKNEIGWFDDTNNTSSMLSSRLDMDATLFRTIVVDRSTVLLQNVGLVVASFIIAFMLNWRLTLVVLATYPLIISGHISEKLFMKGFGGNLSTAYHKANMLAGEAVSNIRTVAAFCSEEKVLKLYANALAEPSKLSFKRGQISGIFYGISQFFIFSFYGLALWYGSVLMGKELASFESVMKTFMVLIVTAFGMGEALALAPDLLKGNQMVASVFEVMDRKPGMMADAGEELKMVEGTIELKGIHFSYPSRPDVVIFKDFNLKVPSGKSIALVGQSGSGKSSVISLILRFYDPSSGRVMIDGKDIRRLHLKSLRKHIGLVQQEPALFATSIHENILYGKEGASDSEVIEAAKLADAHSFISSLPDGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESEHVVQQALDRLMKNRTTVMVAHRLSTIRNADQISVLHNGKIIEQGTHSSLRENKNGAYFKLVNLQ 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00126 1243 Gene3D ABC transporter type 1, transmembrane domain 35 974 IPR036640 GO:0005524|GO:0016020
Accr22g00126 1243 CDD ABC_6TM_Pgp_ABCB1_D1_like 48 345 - -
Accr22g00126 1243 Gene3D - 362 611 IPR027417 -
Accr22g00126 1243 SUPERFAMILY ABC transporter transmembrane region 672 988 IPR036640 GO:0005524|GO:0016020
Accr22g00126 1243 MobiDBLite consensus disorder prediction 1 24 - -
Accr22g00126 1243 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 608 IPR003439 GO:0005524
Accr22g00126 1243 FunFam ABC transporter B family member 19 362 611 - -
Accr22g00126 1243 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 972 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr22g00126 1243 Gene3D - 995 1243 IPR027417 -
Accr22g00126 1243 CDD ABC_MTABC3_MDL1_MDL2 1005 1243 - -
Accr22g00126 1243 PANTHER ABC TRANSPORTER B FAMILY 15 613 IPR039421 -
Accr22g00126 1243 CDD ABC_MTABC3_MDL1_MDL2 372 610 - -
Accr22g00126 1243 Pfam ABC transporter 1024 1172 IPR003439 GO:0005524
Accr22g00126 1243 Pfam ABC transporter 391 539 IPR003439 GO:0005524
Accr22g00126 1243 Pfam ABC transporter transmembrane region 687 957 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr22g00126 1243 Pfam ABC transporter transmembrane region 49 320 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr22g00126 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 610 IPR027417 -
Accr22g00126 1243 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 988 - -
Accr22g00126 1243 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 50 337 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr22g00126 1243 ProSitePatterns ABC transporters family signature. 1144 1158 IPR017871 GO:0005524|GO:0016887
Accr22g00126 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1243 IPR027417 -
Accr22g00126 1243 SMART AAA_5 399 585 IPR003593 GO:0016887
Accr22g00126 1243 SMART AAA_5 1032 1218 IPR003593 GO:0016887
Accr22g00126 1243 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1005 1241 IPR003439 GO:0005524
Accr22g00126 1243 SUPERFAMILY ABC transporter transmembrane region 29 351 IPR036640 GO:0005524|GO:0016020
Accr22g00126 1243 ProSitePatterns ABC transporters family signature. 511 525 IPR017871 GO:0005524|GO:0016887
Accr22g00126 1243 FunFam ABC transporter B family member 4 995 1243 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00126 21 1243 Calmodulin-binding Proteins AT2G36910 49.079 0.0 1187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00126 K05658 - gmx:100810688 2019.2