Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00120 ATGGATGGAGAGAACAAGAGCAGTGAAGATGGCGGTGATGTCCAGATGGCGGTTCCGGCACCGCCACCCATGTCTAATGCGAACGCTCCACCACCGTTTCTTAGTAAGACGTATGACATGGTGGATGACCAGGCCTCTGATGCGATCGTGTCTTGGAGCCCAACCAATAACAGCTTCGTGGTTTGGAACCCACCAGAGTTTGCCAGAGATCTCTTGCCCAAGTACTTCAAGCACAATAATTTCTCCAGCTTTGTGAGGCAGTTGAACACTTATGGTTTTCGGAAGGTGGATCCAGATCGATGGGAATTTGCAAATGAGGGCTTTTTAAGGGGGCAGAAGCACTTGCTTAAGAGTATTACTCGACGAAAACCAGCCCATGGCCATAGTAATCAACAAACACAACACTCACAGGGACAGAATTCATCAGTAGGGGCATGTGTAGAAGTTGGGAAGTTTGGACTTGAAGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGGTTGAGGCAGCAGCAACAGTCCACTGATAACCAGATGCAGACAATGGTTCAGCGCCTTCAGGGAATGGAACAACGACAACAACAAATGATGTCATTCCTTGCCAAGGCTGTCCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAGAATGAGAGCAATAGACGCATAACTGAAGCCAACAAAAAACGACGGCTTAAGCAGGAAGGTATTGCTGAAACAGAATGTAATACTGCTTCTGATGGACAAATTATTAAGTATCAGCCTCTGATGAATGAAGCAGCAAAAGCAATGCTAAGGCAGATAATGAAATTGGATACTTCAAGGGTGGAATCTTTTAATAACAACAACCTTGATAATTACTTGATTGGGGATGGTTCATCACCATCCAGTGCAATGGACAGTAGTGGCTCTTCAAGCTGGACTTCTGAAGTTACACTTCAAGACGTCCCACCAACTGCGTCAGGAACTTCTGGGCCCTCAGCCGATAAGTCCAAAATCCCATCTACCAAAGCTGCACATGCTGCCTCTGCTCCTCAGGCAGACGTCATAATGCCTGAGCTTTCGCCCATACCAGAGATGGTACCAGAAGGTATTCCATCAGTTCCTGAAGGAAATTATGTGGGACCTGCGATGGACAACATGGATCCTACGTCATTGGGAGTGAATGGGTCATTGCCCACTGATGTTGGTAGTTTTTCTCCTGAAGCAGACATTGAGGATTTGTTACGCAATCCTTCCTTTTGGGATGATTTTCTACTGCAAAGTCCAATCCCTGAGGATATCGAGATTAATGCTGCTGAAGCAGTGTCCAATGAGGTGCAGCCAATGGAAGACGGGTGGGACAAAGCTGAGCGCATGAGCCAACTTACAGGGCAGATGGGTCTTCTTTCTTCTGATCCAGGAGCAGGTTGA 1437 0.4683 MDGENKSSEDGGDVQMAVPAPPPMSNANAPPPFLSKTYDMVDDQASDAIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHSNQQTQHSQGQNSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQMQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNESNRRITEANKKRRLKQEGIAETECNTASDGQIIKYQPLMNEAAKAMLRQIMKLDTSRVESFNNNNLDNYLIGDGSSPSSAMDSSGSSSWTSEVTLQDVPPTASGTSGPSADKSKIPSTKAAHAASAPQADVIMPELSPIPEMVPEGIPSVPEGNYVGPAMDNMDPTSLGVNGSLPTDVGSFSPEADIEDLLRNPSFWDDFLLQSPIPEDIEINAAEAVSNEVQPMEDGWDKAERMSQLTGQMGLLSSDPGAG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00120 478 Pfam HSF-type DNA-binding 33 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr22g00120 478 ProSitePatterns HSF-type DNA-binding domain signature. 72 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr22g00120 478 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 21 314 IPR027725 -
Accr22g00120 478 PRINTS Heat shock factor (HSF) domain signature 33 56 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr22g00120 478 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr22g00120 478 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr22g00120 478 Coils Coil 151 178 - -
Accr22g00120 478 MobiDBLite consensus disorder prediction 121 142 - -
Accr22g00120 478 MobiDBLite consensus disorder prediction 302 339 - -
Accr22g00120 478 MobiDBLite consensus disorder prediction 125 142 - -
Accr22g00120 478 MobiDBLite consensus disorder prediction 1 31 - -
Accr22g00120 478 SMART hsfneu3 29 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr22g00120 478 SUPERFAMILY "Winged helix" DNA-binding domain 28 122 IPR036390 -
Accr22g00120 478 Gene3D - 25 123 IPR036388 -
Accr22g00120 478 MobiDBLite consensus disorder prediction 302 355 - -
Accr22g00120 478 FunFam Heat shock transcription factor 1 26 123 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00120 7 472 HSF AT1G32330 54.227 1.90e-168 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr22g00120 HSF_DNA-bind 4.1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00120 K09419 - gmx:732544 611.683