Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00110 ATGTATGGGGATTGTCAAGTGCTGTCAAGCATGGGAGGTAACATAGTAGTGAACTCAGAAACTCTCTTTACTTCGTCAATCCAAAACTCCAACTTTAACTTCATACCCACCATGCCTTTTCATCAACCTTTCCAACCTCCTCCCATGCAGAAAGAAGAAGAGGGGACAATGATGATGATGAGAGGGAAGGAAGAGATAATGGAGAGTGGGTCAGGAAGCGAACAAGCTGATCAAGAAAAGTCTGGGAACGAACAAGACAGTGAACAGCCAGCCAACAAGAAGAAACGTTACCACAGGCACACTGCTCGTCAGATCCAAGAAATGGAAGCTCTATTCAAGGAATGTCCACACCCAGACGACAAGCAAAGGATGAAACTAAGCCAAGAGCTGGGTTTGAAGCCACGCCAAGTCAAGTTCTGGTTTCAAAATCGTCGAACTCAGATGAAGGCTCAACAAGATAGAGCTGATAATGTGATACTGAGAGCAGAAAATGAGAATCTGAAGAATGAGAACTATCGTCTACAAGCAGCATTGCGTAATGTGATGTGTCCTAATTGTGGTGGTCCTGCCATGATGGGCGCTGATCTCGGCATGGACGACCATCACCTTCGCCTTGAAAATGCTCGCCTCAGAGAAGAGCTAGAACGAGCGTGTTGTCTCACATCAAGATACACAGGCCGTGCAATGCAAACAATGGCATCACCACCATCACCTGCTCTAATGGCTCCTTCATTGGATTTGGACATGAACATATACTCAAGGCACTTCACCGATCCCGTCGTCTCTTGTACATCGGAGATGATTCCGGTCCCAATGTTGCCTCCTTCGGATCTTACTTCACCATTCCCAGACGGTGGTGGTGGCCTGTTATTGATGGAAGAAGACAAGCCTCTTGCTTTGGAGCTCGCCGTGTCGTCCATGAATGAACTAGTCAAGATGTGTCAGGGAAACGATCCTCTTTGGATAAGAAACAATGATAATGAGAGCGAAATTCTCAATTTTGAGGAACATGCTAGGCTCTTTCATTGGCCTCTCAACCTCAAGAACCATTCCACTGAACTTAGAAGAGAAGCTAGCCGTGACACTGCTGTGGTTATAATGAATAGTGTCACTCTTGTTGACGCCTTCCTTGATGCTATTAAGTGGATGGAATTGTTCCCCACCATTGTTTCTAGGGCAAAAACTGTTCAAGTTATATTGTCTGGTGCTTCTGGTCATGCAAGTGGGTCACTTCAACTGATGTACGCAGAATTACAGGTGATATCTCCGTTGGTGCCGACTCGTGAGACTCATTTTCTTCGTTACTGCCAACAAAATGCGGAGGAGGGGACATGGGCAATTGTTGATTTTCCTCTTGATAGCTTCCATGAAAGCTTTCACCATTCTTATCCCAGATATTGCAGGCGACCCTCCGGCTGTATTGTTCAAGACATGCCTAATGGGTACTCTAGGGTAACATGGGTGGAGCATGCAGAGGTGGAAGAGAAACCAGTGCATCAGATATTCAGTAACTATGTGTACAGTGGAATGGCCTATGGAGCACAGCGTTGGTTAGGGGTTTTGCAGAGACAATGTGAGAGGGTCGCCAGCCTCATGGCCAGGAATATTTCAGACCTTGGAGTGATACCGTCACCGGAAGCCAGAAAGAACTTAATGAAATTGGCTCAAAGAATGATAAGAACGTTCAGCCTGAACATGAGCACGTCGAGTGGGCAATCATGGACGGCGTTATCAGATTCTGCTGAAGACACTGTTAGGATTACAACAAGGAAGATTACAAACCCAGGTCAACCAAACGGGGTCATACTCAGTGCTGTCTCCACCACCTGGCTTCCTCATTCTCACTCCAAGGTCTTTGACCTCCTCAAGGACGAACGTCGCAGATCTCAGTTGGATTTTCTCTCCAATGGCAACTCTTTGCATGAAGTGGCTCATATTGCAAATGGCTCGCATCCAGGAAATTGCATCTCCCTTTTACGGATTAACGTGGCTAGCAACTCATCTCAGAACGTAGAGCTCGTGGTGCAAGAGAGTTGTACCGATCAGTCCGGGAGTCTGGTGGTGTACGCCAACATTGACGTCGAGTCCATCCAGCTCGCCATGTCCGGTGAGGATCCTTCCGCCATAGCACTTCTTCCACAGGGCTTCGTCATAGTTCCGGCGACAAATACAACCTCCAATCCAACTGATTCTGCTTCGGCGGCCACTGCTGGCGGAGGAGGAGCTCCACCACTACCGCCACCTTCTTCTTCTCCTAATCTGAACCAAGCTTGTCTTCTCACAGTGGGCCTCCAAGTTCTAGCCAGCACCAGCCCTTCTGCAAAACTCAGCCTCTCCAGCGTCACCGCCATTAACAACCATCTCTGCAACACTCTCCACCAAATCGAAGCCGCTCTTTCCACCGACAATGGCACTTTCGTCGTCGAACCCATCATCACTTCTACCCCTAAGCAGTAG 2457 0.4794 MYGDCQVLSSMGGNIVVNSETLFTSSIQNSNFNFIPTMPFHQPFQPPPMQKEEEGTMMMMRGKEEIMESGSGSEQADQEKSGNEQDSEQPANKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKNENYRLQAALRNVMCPNCGGPAMMGADLGMDDHHLRLENARLREELERACCLTSRYTGRAMQTMASPPSPALMAPSLDLDMNIYSRHFTDPVVSCTSEMIPVPMLPPSDLTSPFPDGGGGLLLMEEDKPLALELAVSSMNELVKMCQGNDPLWIRNNDNESEILNFEEHARLFHWPLNLKNHSTELRREASRDTAVVIMNSVTLVDAFLDAIKWMELFPTIVSRAKTVQVILSGASGHASGSLQLMYAELQVISPLVPTRETHFLRYCQQNAEEGTWAIVDFPLDSFHESFHHSYPRYCRRPSGCIVQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSGMAYGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTALSDSAEDTVRITTRKITNPGQPNGVILSAVSTTWLPHSHSKVFDLLKDERRRSQLDFLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELVVQESCTDQSGSLVVYANIDVESIQLAMSGEDPSAIALLPQGFVIVPATNTTSNPTDSASAATAGGGGAPPLPPPSSSPNLNQACLLTVGLQVLASTSPSAKLSLSSVTAINNHLCNTLHQIEAALSTDNGTFVVEPIITSTPKQ 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00110 818 FunFam Homeobox-leucine zipper protein HDG1 81 167 - -
Accr22g00110 818 SUPERFAMILY Homeodomain-like 81 152 IPR009057 -
Accr22g00110 818 SMART START_1 301 527 IPR002913 GO:0008289
Accr22g00110 818 Pfam Homeodomain 94 149 IPR001356 GO:0003677
Accr22g00110 818 ProSiteProfiles 'Homeobox' domain profile. 91 151 IPR001356 GO:0003677
Accr22g00110 818 SUPERFAMILY Bet v1-like 563 796 - -
Accr22g00110 818 Pfam START domain 302 527 IPR002913 GO:0008289
Accr22g00110 818 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981|GO:0006355
Accr22g00110 818 SMART HOX_1 92 155 IPR001356 GO:0003677
Accr22g00110 818 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 89 799 IPR042160 -
Accr22g00110 818 MobiDBLite consensus disorder prediction 723 752 - -
Accr22g00110 818 Gene3D - 78 162 - -
Accr22g00110 818 CDD homeodomain 94 152 IPR001356 GO:0003677
Accr22g00110 818 CDD START_ArGLABRA2_like 296 526 - -
Accr22g00110 818 MobiDBLite consensus disorder prediction 66 99 - -
Accr22g00110 818 MobiDBLite consensus disorder prediction 79 93 - -
Accr22g00110 818 SUPERFAMILY Bet v1-like 293 529 - -
Accr22g00110 818 Coils Coil 150 180 - -
Accr22g00110 818 ProSiteProfiles START domain profile. 292 530 IPR002913 GO:0008289
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00110 26 815 Homeobox Transcription Factor Family AT5G46880 58.393 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr22g00110 START 1.5e-38 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00110 - - gmx:100812829 1222.22