Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00108 ATGTATGGGGATTGTCAAGTGCTGTCAAGCATGGGAGGTAACATAGTAGTGAACTCAGAAACTCTCTTTACTTCGTCAATCCAAAACTCCAACTTTAACTTCATACCCACCATGCCTTTTCATCAACCTTTCCAACCTCCTCCCATGAAAGAAGAAGAGGGGACAATGATGATGATGAGAGGGAAGGAAGAGATAATGGAGAGTGGGTCAGGAAGCGAACAAGCTGATCAAGAAAAGTCTGGGAACGAACAAGACAGTGAACAGCCAGCCAACAAGAAGAAACGTTACCACAGGCACACTGCTCGTCAGATCCAAGAAATGGAAGCTCTATTCAAGGAATGTCCACACCCAGACGACAAGCAAAGGATGAAACTAAGCCAAGAGCTGGGTTTGAAGCCACGCCAAGTCAAGTTCTGGTTTCAAAATCGTCGAACTCAGATGAAGGCTCAACAAGATAGAGCTGATAATGTGATACTGAGAGCAGAAAATGAGAATCTGAAGAATGAGAACTATCGTCTACAAGCAGCATTGCGTAATGTGATGTGTCCTAATTGTGGTGGTCCTGCCATGATGGGCGCTGATCTCGGCATGGACGACCATCACCTTCGCCTTGAAAATGCTCGCCTCAGAGAAGAGCTAGAACGAGCGTGTTGTCTCACATCAAGATACACAGGCCGTGCAATGCAAACAATGGCATCACCACCATCACCTGCTCTAATGGCTCCTTCATTGGATTTGGACATGAACATATACTCAAGGCACTTCACCGATCCCGTCGTCTCTTGTACATCGGAGATGATTCCGGTCCCAATGTTGCCTCCTTCGGATCTTACTTCACCATTCCCAGACGGTGGTGGTGGCCTGTTATTGATGGAAGAAGACAAGCCTCTTGCTTTGGAGCTCGCCGTGTCGTCCATGAATGAACTAGTCAAGATGTGTCAGGGAAACGATCCTCTTTGGATAAGAAACAATGATAATGAGAGCGAAATTCTCAATTTTGAGGAACATGCTAGGCTCTTTCATTGGCCTCTCAACCTCAAGAACCATTCCACTGAACTTAGAAGAGAAGCTAGCCGTGACACTGCTGTGGTTATAATGAATAGTGTCACTCTTGTTGACGCCTTCCTTGATGCTATTAAGTGGATGGAATTGTTCCCCACCATTGTTTCTAGGGCAAAAACTGTTCAAGTTATATTGTCTGGTGCTTCTGGTCATGCAAGTGGGTCACTTCAACTGATGTACGCAGAATTACAGGTGATATCTCCGTTGGTGCCGACTCGTGAGACTCATTTTCTTCGTTACTGCCAACAAAATGCGGAGGAGGGGACATGGGCAATTGTTGATTTTCCTCTTGATAGCTTCCATGAAAGCTTTCACCATTCTTATCCCAGATATTGCAGGCGACCCTCCGGCTGTATTGTTCAAGACATGCCTAATGGGTACTCTAGGGTAACATGGGTGGAGCATGCAGAGGTGGAAGAGAAACCAGTGCATCAGATATTCAGTAACTATGTGTACAGTGGAATGGCCTATGGAGCACAGCGTTGGTTAGGGGTTTTGCAGAGACAATGTGAGAGGGTCGCCAGCCTCATGGCCAGGAATATTTCAGACCTTGGAGTGATACCGTCACCGGAAGCCAGAAAGAACTTAATGAAATTGGCTCAAAGAATGATAAGAACGTTCAGCCTGAACATGAGCACGTCGAGTGGGCAATCATGGACGGCGTTATCAGATTCTGCTGAAGACACTGTTAGGATTACAACAAGGAAGATTACAAACCCAGGTCAACCAAACGGGGTCATACTCAGTGCTGTCTCCACCACCTGGCTTCCTCATTCTCACTCCAAGGTCTTTGACCTCCTCAAGGACGAACGTCGCAGATCTCAGTTGGATTTTCTCTCCAATGGCAACTCTTTGCATGAAGTGGCTCATATTGCAAATGGCTCGCATCCAGGAAATTGCATCTCCCTTTTACGGATTAACGTGGCTAGCAACTCATCTCAGAACGTAGAGCTCGTGGTGCAAGAGAGTTGTACCGATCAGTCCGGGAGTCTGGTGGTGTACGCCAACATTGACGTCGAGTCCATCCAGCTCGCCATGTCCGGTGAGGATCCTTCCGCCATAGCACTTCTTCCACAGGGCTTCGTCATAGTTCCGGCGACAAATACAACCTCCAATCCAACTGATTCTGCTTCGGCGGCCACTGCTGGCGGAGGAGGAGCTCCACCACTACCGCCACCTTCTTCTTCTCCTAATCTGAACCAAGCTTGTCTTCTCACAGTGGGCCTCCAAGTTCTAGCCAGCACCAGCCCTTCTGCAAAACTCAGCCTCTCCAGCGTCACCGCCATTAACAACCATCTCTGCAACACTCTCCACCAAATCGAAGCCGCTCTTTCCACCGACAATGGCACTTTCGTCGTCGAACCCATCATCACTTCTACCCCTAAGCAGTAG 2454 0.4792 MYGDCQVLSSMGGNIVVNSETLFTSSIQNSNFNFIPTMPFHQPFQPPPMKEEEGTMMMMRGKEEIMESGSGSEQADQEKSGNEQDSEQPANKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKNENYRLQAALRNVMCPNCGGPAMMGADLGMDDHHLRLENARLREELERACCLTSRYTGRAMQTMASPPSPALMAPSLDLDMNIYSRHFTDPVVSCTSEMIPVPMLPPSDLTSPFPDGGGGLLLMEEDKPLALELAVSSMNELVKMCQGNDPLWIRNNDNESEILNFEEHARLFHWPLNLKNHSTELRREASRDTAVVIMNSVTLVDAFLDAIKWMELFPTIVSRAKTVQVILSGASGHASGSLQLMYAELQVISPLVPTRETHFLRYCQQNAEEGTWAIVDFPLDSFHESFHHSYPRYCRRPSGCIVQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSGMAYGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTALSDSAEDTVRITTRKITNPGQPNGVILSAVSTTWLPHSHSKVFDLLKDERRRSQLDFLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELVVQESCTDQSGSLVVYANIDVESIQLAMSGEDPSAIALLPQGFVIVPATNTTSNPTDSASAATAGGGGAPPLPPPSSSPNLNQACLLTVGLQVLASTSPSAKLSLSSVTAINNHLCNTLHQIEAALSTDNGTFVVEPIITSTPKQ 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00108 817 Pfam Homeodomain 93 148 IPR001356 GO:0003677
Accr22g00108 817 MobiDBLite consensus disorder prediction 722 751 - -
Accr22g00108 817 Coils Coil 149 179 - -
Accr22g00108 817 SMART START_1 300 526 IPR002913 GO:0008289
Accr22g00108 817 SUPERFAMILY Bet v1-like 292 528 - -
Accr22g00108 817 SUPERFAMILY Bet v1-like 562 795 - -
Accr22g00108 817 Gene3D - 77 161 - -
Accr22g00108 817 ProSitePatterns 'Homeobox' domain signature. 125 148 IPR017970 GO:0000981|GO:0006355
Accr22g00108 817 MobiDBLite consensus disorder prediction 78 92 - -
Accr22g00108 817 SUPERFAMILY Homeodomain-like 80 151 IPR009057 -
Accr22g00108 817 ProSiteProfiles 'Homeobox' domain profile. 90 150 IPR001356 GO:0003677
Accr22g00108 817 ProSiteProfiles START domain profile. 291 529 IPR002913 GO:0008289
Accr22g00108 817 SMART HOX_1 91 154 IPR001356 GO:0003677
Accr22g00108 817 MobiDBLite consensus disorder prediction 65 100 - -
Accr22g00108 817 Pfam START domain 301 526 IPR002913 GO:0008289
Accr22g00108 817 FunFam Homeobox-leucine zipper protein HDG1 80 166 - -
Accr22g00108 817 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 88 798 IPR042160 -
Accr22g00108 817 CDD homeodomain 93 151 IPR001356 GO:0003677
Accr22g00108 817 CDD START_ArGLABRA2_like 295 525 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00108 26 814 Homeobox Transcription Factor Family AT5G46880 58.463 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr22g00108 START 1.5e-38 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00108 - - gmx:100812829 1221.07