Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00107 ATGGTGGAAAGAAGACTTTCTTTATCGAAGGAAGCTAGAGATGGGCTAGAATTTTTGAAGCGTAAAAGGCTTGAACGGGCAAAACTCATTACTGCCTCTGAAACAACTGTTGCTAGCACAATGACCAGAAGCGGAGGAGATGCTTTAAGAGCTTCATCTTCATGCGGTGTCAGATTGCATGGCAATGCAGAAATCTTCTCCAAGCGTAAGGTGGATAAGTTTGAGACAAGTGATCTTGAATGGATTGAAAAAATTTCAGAATGTCCTGTGTATTCTCCGACAAAGGAGGAATTTGAGGATCCTCTGGTTTACTTGCAAAAGATAGCTCCAGAAGCTTCAAAATATGGTATATGCAAGATTATTTCACCTGTGAGCGCGTCTGTTCCTGCTGGAGTTGTTTTAATGAAGGAGAAAACAGGATTCAAGTTTACGACTAGAGTACAGCCTCTTCGGCTTGCTGAGTGGGACACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGCAATTATACATTCCGTGAGTTTGAGAAAATGGCCAATAGAGTTTTTGCACATAGATATTCTAGTGCTGGAAGTCTTCCTGCCACATTTTTGGAAAAAGAGTTTTGGCATGAAATTGCTTGTGGACAGATGGAAACTGTTGAATATGCATGTGATGTTGATGGTAGTGCTTTTTCATCTTCTCCTACTGATCAGCTTGGGAACAGCAAATGGAATTTAAAGAAAGTTTCACGGCTGCCCAAGTCCATTTTGCGCCTCCTGGAAACATCAATTCCGGGAGTAACAGAACCTATGCTGTACATTGGAATGCTCTTCAGTATGTTTGCTTGGCATGTGGAAGATCATTATTTGTACAGTATAAATTATCATCACTGTGGTGCATCGAAAACTTGGTATGGCATTCCAGGTCATGCTGCATTGGATTTTGAAAGGGTAGTGAGAGAGCATGTGTACTCTAATGATATTCTTTCTAGTGATGGGGAGGATGGAGCTTTTGATGTTCTTCTGGGGAAAACAACTCTGTTCCCTCCAAATATTTTGTTGGATAATGAAGTCCCTGTCTATAAGGCTGTTCAAAAGCCAGGGGAGTTTGTGATAACTTTTCCTAGAGCATATCATGCTGGATTTAGTCATGGTTTCAACTGTGGAGAAGCAGTGAACTTTGCAATTGGTGATTGGTTTCCTTTAGGAGCTATTGCTAGCCAGCGATATGCAGTTCTTAACAGGATGCCTATGCTGCCTCATGAAGAACTTCTTTGCAAAGAAGCAATGCTTCTTCATACAAACTTAGAACTTGAAGATTCAGACTTCCCCTCTGCAGATCTTTTGGCTCATAATTGCATAAAGATTTCTTTTGTGAATCTAATGCGCTTCCAGCATTGTGCTCGTTGGCTCTTGATGAAATCGAGGGCTTGTTTGAGTGTTTTCCCACATTCGCACAGCACAATTCTCTGTAGCATCTGCAAACGTGATTGCTATGTTGCATATGTAGACTGCAAGTGTCACATGCATGCGGTCTGCCTTCGCCATGATATTGAAGCTTTTGGCTTAACCTGTGGGCAAGAGCACACACTTTATGTGAGGGAGGACATTAGTGATCTGGAAGCTGCAGCCAAGAGGTTTGAGCAGGGAGATGGAATCGTGGATGAGATTCTTAAGCAAACCAAGGGTGATCATAACATGTATTCATATCCTTTGTCAAATGTGTTCCAAAGAGCTGAAGCAAAGGGATATACTCCTTATTGCGACATAGAATTTGATCAAGTTGTTGAACATTATTCAACCCCAGATCTGGCTAGAAGTAATCCAGAGCGCAATTTACAAAGTCAACTTGTTTTGAGGCACAGCCCAGATTTTAAACCAGAAGTCTGCGAGGCTTCTTTTACTTCTGCTGCGTCCACCCTTTATTCTCTTTCAGAACCTGTTGATAGGTCTTCTGCTCTCAAAAGTGACGATGGGCCAGCTTATTTTACATCAGGCTCTGTTGATTCCGAAGGATGTTGTGAAGGAGCATTGAATGTCGCATGCCAATCACCAGGGCGCTATCACGAGATCTCAAGTAAACCTCAGCGCCATCTCGATGAATTAGAGATGACGCCCATTGTGGATAAAGAGGATAGCGATTCTGATTCAGAAATATTTAGGGTGAAGCGGCCATCTTCTCTGAAGGCAGAGAAAAGAAATGTGAGCACTACCATGTCTTCCAGGCATTCGGACCCACAGGGGATGAAACGATTGAAGAGGGAGGATGAAGGAAGTAGCCCGACACAGGGAATGGAATGCAGCAGAAGCAACGATTCAATGAAACGGAAAGTGGAGAGTGAAAGATGGGTGAGGGACAAATTTGGAGGGGGAAATAGCATTCCCATATCTGTGAGGTATAAGAAGGTGAGCAATGGGGGAGCTAGTAGGGAGCGAGATCACAACAGGAAATACAGGTTCCAGCAGGCAGCTAGGGAACAACGACCTCCCTTTGAGATGGGTTCCAGTCGCCTAAAAGTCAGAGGCCCATCGTTGTGGAGCTTAGAGGGTCCTCCTGGTTTTGCCTCTAAATGGTGA 2559 0.4334 MVERRLSLSKEARDGLEFLKRKRLERAKLITASETTVASTMTRSGGDALRASSSCGVRLHGNAEIFSKRKVDKFETSDLEWIEKISECPVYSPTKEEFEDPLVYLQKIAPEASKYGICKIISPVSASVPAGVVLMKEKTGFKFTTRVQPLRLAEWDTEDKVTFFMSGSNYTFREFEKMANRVFAHRYSSAGSLPATFLEKEFWHEIACGQMETVEYACDVDGSAFSSSPTDQLGNSKWNLKKVSRLPKSILRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALDFERVVREHVYSNDILSSDGEDGAFDVLLGKTTLFPPNILLDNEVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASQRYAVLNRMPMLPHEELLCKEAMLLHTNLELEDSDFPSADLLAHNCIKISFVNLMRFQHCARWLLMKSRACLSVFPHSHSTILCSICKRDCYVAYVDCKCHMHAVCLRHDIEAFGLTCGQEHTLYVREDISDLEAAAKRFEQGDGIVDEILKQTKGDHNMYSYPLSNVFQRAEAKGYTPYCDIEFDQVVEHYSTPDLARSNPERNLQSQLVLRHSPDFKPEVCEASFTSAASTLYSLSEPVDRSSALKSDDGPAYFTSGSVDSEGCCEGALNVACQSPGRYHEISSKPQRHLDELEMTPIVDKEDSDSDSEIFRVKRPSSLKAEKRNVSTTMSSRHSDPQGMKRLKREDEGSSPTQGMECSRSNDSMKRKVESERWVRDKFGGGNSIPISVRYKKVSNGGASRERDHNRKYRFQQAAREQRPPFEMGSSRLKVRGPSLWSLEGPPGFASKW 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00107 852 PANTHER LYSINE-SPECIFIC DEMETHYLASE 80 766 - -
Accr22g00107 852 MobiDBLite consensus disorder prediction 725 739 - -
Accr22g00107 852 MobiDBLite consensus disorder prediction 700 831 - -
Accr22g00107 852 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Accr22g00107 852 Pfam jmjN domain 89 121 IPR003349 -
Accr22g00107 852 Pfam C5HC2 zinc finger 485 536 IPR004198 -
Accr22g00107 852 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Accr22g00107 852 FunFam Lysine-specific demethylase isoform A 83 432 - -
Accr22g00107 852 SUPERFAMILY Clavaminate synthase-like 225 421 - -
Accr22g00107 852 Gene3D Cupin 88 441 - -
Accr22g00107 852 MobiDBLite consensus disorder prediction 700 724 - -
Accr22g00107 852 MobiDBLite consensus disorder prediction 799 817 - -
Accr22g00107 852 SMART JmjN_1 87 128 IPR003349 -
Accr22g00107 852 MobiDBLite consensus disorder prediction 740 754 - -
Accr22g00107 852 MobiDBLite consensus disorder prediction 764 780 - -
Accr22g00107 852 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Accr22g00107 852 SMART cupin_9 232 405 IPR003347 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00107 85 542 JUMONJI Transcription Factor Family AT2G34880 32.458 4.29e-65 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr22g00107 JmjC 6.8e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00107 - - gmx:100798611 1227.62