Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00105 ATGATGGAGCTATTCCCAGCACAGCCAGATTTGTCTCTGCAAATCAGCCCTCCAAACACCAAACCCACCACTTCAAATTGGAGCAGTAGAGATACTAATACTAATAATAATGGGGGAGGCTGGAAGAGAGCTTTAGAGTACCCCTCTCACTCTCACACCTCCATGCCCAAATCCAAACCTTGCCAAACTAATAATCTCATTCAACATCATCACTCCTTCGACCTCTCCCTCTCCTCCACACCTCCTCCTCCTTCTTCTTCACTCTGCAACAACAATAACAACTTCCACCACCACCACCGCCATTTACTCCAAAACGGCGTCAATAATGTCAATACGTCGTCGTTTCGCCACAGCCTGGGATTTCTCAGACCCATCAGAGGGATCCCTCTCTACCAAAACCCTCCTTCTAATATCCCATTCGGTGCTCTTGTTGATGCACATAATAATTATTCCACTCCTCTTCCTCCTCCATCATCTCTATCTAACAACAGTAATACAACCTCCTCGTCAAGCCCTTTTCATTCGACTCACCACCACCACCACCAAGGTTTGATGACGAGGTCGACGTTGTTGTCTCGTTTCCCCGCTAAGCGAAGCATGAGAGCCCCTCGCATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTCCACGCCGTCGAGCTCCTCGGCGGCCATGAAAGGGCAACGCCCAAGTCAGTTCTTGAGCTCATGGATGTCAAGGATCTCACTTTAGCTCATGTCAAATCTCATCTTCAGATGTACCGAACGGTGAAAACCACAGATAAAGCTGCTGCTGCTGCTTCCTCAGTTGAAGGGCAATCTGATGTATATGATAATGGGTCATCTGGAGATAATTCTGAAGATTTCATGTTTGACATGAACACTTCATCAAGAAGGTCTGATGTATCTACCAAGCAAGCAAAAGAAGGTGTTAATCGTGATAAAGAACATCATGGACTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGCTGGATTATTGTGCAGGAAACTTGAGTTCTTTTGAGAAGGAAATGGATCCAAAATGCCTAAGTTACGAGAGAGTATCAGATGGAAGTGCATCGTCAGATGTTTCAGGAACAAGCCCCAAGAAACCAAATTTAGATTTGGAGTTTAGCTTAGGGCAGCCACTTTGA 1170 0.4641 MMELFPAQPDLSLQISPPNTKPTTSNWSSRDTNTNNNGGGWKRALEYPSHSHTSMPKSKPCQTNNLIQHHHSFDLSLSSTPPPPSSSLCNNNNNFHHHHRHLLQNGVNNVNTSSFRHSLGFLRPIRGIPLYQNPPSNIPFGALVDAHNNYSTPLPPPSSLSNNSNTTSSSSPFHSTHHHHHQGLMTRSTLLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAAAASSVEGQSDVYDNGSSGDNSEDFMFDMNTSSRRSDVSTKQAKEGVNRDKEHHGLWSNSSREAWLHGKPKLDYCAGNLSSFEKEMDPKCLSYERVSDGSASSDVSGTSPKKPNLDLEFSLGQPL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00105 389 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 9 388 IPR044847 GO:0000976|GO:0006355|GO:0010158
Accr22g00105 389 MobiDBLite consensus disorder prediction 266 319 - -
Accr22g00105 389 MobiDBLite consensus disorder prediction 12 40 - -
Accr22g00105 389 MobiDBLite consensus disorder prediction 153 186 - -
Accr22g00105 389 Gene3D - 202 259 - -
Accr22g00105 389 Pfam Myb-like DNA-binding domain 204 255 IPR001005 -
Accr22g00105 389 MobiDBLite consensus disorder prediction 360 374 - -
Accr22g00105 389 MobiDBLite consensus disorder prediction 302 319 - -
Accr22g00105 389 MobiDBLite consensus disorder prediction 1 63 - -
Accr22g00105 389 MobiDBLite consensus disorder prediction 359 389 - -
Accr22g00105 389 MobiDBLite consensus disorder prediction 266 301 - -
Accr22g00105 389 FunFam Myb family transcription factor 201 259 - -
Accr22g00105 389 MobiDBLite consensus disorder prediction 153 173 - -
Accr22g00105 389 NCBIfam myb-like DNA-binding domain, SHAQKYF class 203 256 IPR006447 GO:0003677
Accr22g00105 389 SUPERFAMILY Homeodomain-like 200 256 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00105 2 388 G2-like Transcription Factor Family AT4G17695 37.093 4.43e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr22g00105 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00105 - - aprc:113868756 388.652