Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00100 ATGGGTAGCGGTGACATGGATAAAACTCCAAAAGAGAAGGAGCCAAAGACACCTCCGGCTATGTCACAGGAGCTGTCTTCAACTCCTGGCACTGGTACAATTAATCCTGATTGGTCCAGCTTTCAGGCATATTCTCCAATGCCTCCACATGGGTTCTTAGCATCAAGTCCTCAAGCTCACCCATATATGTGGGGTGTCCAGCATATAATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGTATATATGCTCATCCATCTATGCCTTCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCTGATCCTTCGGGCAATACTCTTGGCAACATGGAAGCTGACGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCGATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGAAAGAATGTTCAACATAGTAAAGCGCCAGGGACATCTGCCAATGGAGTTCTTTCAAAAAGTGGTGAAAGCGCGAGTGAAGGTACTAGTGAAGGAAGTGATTCAACTTCTCAGAATGACTCACAGCTGAAATCAGAGGGAAGGCAGGACTCTTTGGGAGATGAACCATCTCAAAATGGAGGTTCGATGCATGCTCCACAAAACGGGGGACTTAATGCACCTCATAATATGGTCAATCAAAATATGAGTATCTTGCCTATCCCTGCTGCTGGTGCTCCTGTTGGAGTTTCTGGTCCCACGACAAATTTAAACATAGGAATGGATTATTGGGGTGCACCCACTTCATCCACTATTCCTGCACTGCGTGGAAAGGTTCCTTCTACTGCTGGATCACGGGAGAGTGTTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAGCTAAAGAGACAAAGACGGAAGCAGTCTAATAGGGAATCAGCTCGCAGATCTAGGTTGCGCAAACAGGCTGAATGTGATGAACTAGCCCAGCGAGCTGAGGCTTTAAAAGAAGAGAATGCTACTATCCGCTCTGAAGTGAATCGGATTAGGAGTGAGTACGAGCAGCTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTTGGGGAATCTTCTGAGAATGAGGAACAGAGGCTGAGCGGGAAGGACCAACATGTGGATAGTGACACTCAACAGGCTGAGCAGACAGAAGCCGTGCAGGGCAGTCATTAA 1206 0.4652 MGSGDMDKTPKEKEPKTPPAMSQELSSTPGTGTINPDWSSFQAYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPSGSYPFSPFAMPSPNGIADPSGNTLGNMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNVQHSKAPGTSANGVLSKSGESASEGTSEGSDSTSQNDSQLKSEGRQDSLGDEPSQNGGSMHAPQNGGLNAPHNMVNQNMSILPIPAAGAPVGVSGPTTNLNIGMDYWGAPTSSTIPALRGKVPSTAGSRESVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATIRSEVNRIRSEYEQLLSENAALKEKLGESSENEEQRLSGKDQHVDSDTQQAEQTEAVQGSH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00100 401 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Accr22g00100 401 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 299 362 IPR004827 GO:0003700|GO:0006355
Accr22g00100 401 MobiDBLite consensus disorder prediction 146 219 - -
Accr22g00100 401 CDD bZIP_plant_GBF1 302 352 IPR045314 GO:0003700|GO:0006355
Accr22g00100 401 Gene3D - 300 354 - -
Accr22g00100 401 MobiDBLite consensus disorder prediction 364 388 - -
Accr22g00100 401 MobiDBLite consensus disorder prediction 118 230 - -
Accr22g00100 401 Pfam bZIP transcription factor 297 359 IPR004827 GO:0003700|GO:0006355
Accr22g00100 401 MobiDBLite consensus disorder prediction 1 41 - -
Accr22g00100 401 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 304 319 IPR004827 GO:0003700|GO:0006355
Accr22g00100 401 SMART brlzneu 297 361 IPR004827 GO:0003700|GO:0006355
Accr22g00100 401 Coils Coil 317 372 - -
Accr22g00100 401 MobiDBLite consensus disorder prediction 263 323 - -
Accr22g00100 401 MobiDBLite consensus disorder prediction 362 401 - -
Accr22g00100 401 SUPERFAMILY Leucine zipper domain 300 356 IPR046347 GO:0003700|GO:0006355
Accr22g00100 401 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 391 IPR044827 GO:0003700|GO:0006355|GO:0043565
Accr22g00100 401 MobiDBLite consensus disorder prediction 1 18 - -
Accr22g00100 401 MobiDBLite consensus disorder prediction 20 41 - -
Accr22g00100 401 Pfam Disordered region downstream of MFMR 135 272 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00100 1 395 bZIP Transcription Factor Family AT2G35530 61.029 5.42e-161 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr22g00100 MFMR_assoc 1.2e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00100 K09060 - gmx:778122 613.994