Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00088 ATGGCAGAAAGTCCTGTGTTGTTCTTGCTAGACAAGCTCACATCTTTACTGCAAGAAGAAGTTCAGCTTTTAAAGGGTGTTCGCACAGATGTTCAGTTCATTAAAGACGAACTAGAGCGACTCAAGGCAATCTTAAGAATGGCCGATGCTTTGGAAGACAAAGACCCAGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTGGCTCATGACATGGAAGATGCCATAGATGAATTCACTATTCGCCTTGTGGATCATCGTGGCCAACATGGCCACAACAATAATTTTGCTCTCGGAAGATTTGTTTCAGCCATCAAAGCTCTCAGAGCTCGCCATCGGATTGCTTTGGACATTCAAGAGATCAAAGGCAGAGTCGAACACATCTCCAAGGATGGTCGCACCATAACTGAGATTGGGTCAAGCTCGAATCAGAATTATACATCGCGGATTGATAGCCAACAAGATGCACTTCTGCTTGAGGAAGCTGATCTTGTAGGTATTGAGAAGCCAAAGAAGCAGCTAATTGACTTGCTTTACCAGGATGAAAAAGGAAAAGTAGTGATTCCAATCTATGGAATGGGGGGATTGGGGAAAACGACAGTGGCAAAGCAAGTCTATGATGATCCAAAAGTGAAGAAGCGTTTCAAGATGCACGCTTGGGTCACAGTTTCTCAATCCTTCAACATCAAAGAGCTTCTAAGAGACCTGGTTCAACAACTTTTCCAAGTCATTGGAAAACCAGCTCCTGCAAAAATTGGCACAATGACAGTTGACAATCTTAAGGAGGTGGTCAAGATTCGGCTTCAACAAAGTAGGTACCTCATTGTCCTCGACGACATATGGCGCGTAAATTCATGGGATTCTATCAAACTTGCTTTGCCTAATAACAACTATGGTAGTAGAATAATGGTGACAACAAGAAACAAAGATGTGGCACTTTCTTGCTGTACTGAGTTGCAGGGTAAGATCTATAACCTGGAATTCTTACCTCAGAATGAAGCATGGTCTCTTTTCTGTAAGAAAACATTTCGCGGGAATTCATGTCCTTCTCATTTGGAGGAGCCATGTAAGAGTATCTTGAAGAGATGTGGGGGATTGCCTCTTGCTATTGTTGCAATTAGTGGTGCTTTGGCCACAAAAGATAGAACCAACATAGAAGAATGGTCAGTTGTTAGTAAAAGTTTTGCTTCTGAGATTGAGAGCAATGACAAAATGGAGGATATGATCAAAGTGCTTTCTCTAAGTTTCAATGACCTGCCTTACTATCTTAAATCCTGCTTGTTGTACCTGATCATCTTCCCGGAGTTTTACGCCACCCAGCACATGAGGCTGATTCGCCTGTGGATAGCTGAAGGGTTTGTCAATGGAGAAGAAGGACGGACACCAGAAGAAGTTGCAGAGGGTTACCTGAAGGAGCTCTTGAACCGGAGTCTGATTCAGGTGGTAGAGAAACGTAGTGATGGCAGGATGAAGACTTGTCGTGTTCACGACTTTCTACGGGACATCATCAATTTGAAGTCAAAAGATCAGAACTTTGCAACAATAGCTAGAGACCAGGACATAATCTGGCCAGAAAGAGTTCGCCGCTTATCAGTAATCAACAGTTTGCAGAACATACAGCAACATAGGACATCATTCCAACTACGTTCTCTGTTAATGTTTTCTTTAGCAGATTCACATGATCATATCTCCATATCTGCATTATTCCCACATGGTTGTAGGCTGCTCAGGGTGCTAGATCTACAAGATGCGCCTTTGGAATCGTTTCCAACTGAAATCGTCAACCTTTACCACCTGAAGTATCTAAGCCTGAAGAACACAAAGGTGAAAACCATTCCAGGCTCCATTACGAATCTTCAAAACTTGGAGACATTAGACCTTAAACACTCCCTGGTCACTGAATTGCCAGTTGAAATCTTGGAGCTGCATCGGCTTCGCCATCTCCTGGTGTATTATTATGAGATCGAATCCTATGCTCATTTCCACTCAAGACATGGTTTCAAGCTGCGTGGTCCAATAGGATGCATGCAATCTCTGCAAAAGCTTTGTTTCATTGAAGCAAGTCAAGACTTAATGGTTGAGCTCGGAAAGCTCACTCAACTCAGAAGGCTGGGCATAAGAAAGCTGAAGAAAGAACATGGAGCTGCTTTATGCTCCTCTATTCAAAAAATGACCAATCTCAGATCTTTGTCTATAACTGCAATAGAAGAAGATGAAATCATTGACATCCAAAACATTACCAAGCCTCCTCCATATTTGAGACAATTGTACTTTTGTGGACGTTTAGAGAAGTTACCAGAATGGATACCCTCTCTAAAGAATCTAGTAAGAGTGTACTTGAAATGGAGCAGGTTAGAGGAGGATCCTCTAGGGTATCTTCAAGATTTGCCAAATCTAATTCATCTCGAGTTTTTACAGGTTTATGTCGGCGAGACACTGCATTTCAATGCAGGGAAGTTTCCAAGTTTGAAGCTTTTAGGGCTTGATGATTTGGGTGGATTGAAATCCATAATAGTGGAGGAAGCATCAATGCCTAATCTGAAAAGATTGATTATCCAGAGATGTGGATCATTGAAGCAGGTACCTTTTGGAATAGAATATTTGAGGAAGCTAAAAACAATTGACTTTTTTGATATGCCTGATGAATTGATCGATGCTTTGAGTCCAAATGAAGGTGAAGATCATTGGAGAGTTGAACATGTACCTACCGTTTATTCAATTTACCGGAAATCTAGTACATGGGATGTCTACTCATTGGATACATTTGAAGAGAGAGATAATTCTTCAAGTAGTAATAATGTTGCAACGAAAAGTCATGAGATTCGTCCAATGTGGAAGGTTTAA 2844 0.4156 MAESPVLFLLDKLTSLLQEEVQLLKGVRTDVQFIKDELERLKAILRMADALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVDHRGQHGHNNNFALGRFVSAIKALRARHRIALDIQEIKGRVEHISKDGRTITEIGSSSNQNYTSRIDSQQDALLLEEADLVGIEKPKKQLIDLLYQDEKGKVVIPIYGMGGLGKTTVAKQVYDDPKVKKRFKMHAWVTVSQSFNIKELLRDLVQQLFQVIGKPAPAKIGTMTVDNLKEVVKIRLQQSRYLIVLDDIWRVNSWDSIKLALPNNNYGSRIMVTTRNKDVALSCCTELQGKIYNLEFLPQNEAWSLFCKKTFRGNSCPSHLEEPCKSILKRCGGLPLAIVAISGALATKDRTNIEEWSVVSKSFASEIESNDKMEDMIKVLSLSFNDLPYYLKSCLLYLIIFPEFYATQHMRLIRLWIAEGFVNGEEGRTPEEVAEGYLKELLNRSLIQVVEKRSDGRMKTCRVHDFLRDIINLKSKDQNFATIARDQDIIWPERVRRLSVINSLQNIQQHRTSFQLRSLLMFSLADSHDHISISALFPHGCRLLRVLDLQDAPLESFPTEIVNLYHLKYLSLKNTKVKTIPGSITNLQNLETLDLKHSLVTELPVEILELHRLRHLLVYYYEIESYAHFHSRHGFKLRGPIGCMQSLQKLCFIEASQDLMVELGKLTQLRRLGIRKLKKEHGAALCSSIQKMTNLRSLSITAIEEDEIIDIQNITKPPPYLRQLYFCGRLEKLPEWIPSLKNLVRVYLKWSRLEEDPLGYLQDLPNLIHLEFLQVYVGETLHFNAGKFPSLKLLGLDDLGGLKSIIVEEASMPNLKRLIIQRCGSLKQVPFGIEYLRKLKTIDFFDMPDELIDALSPNEGEDHWRVEHVPTVYSIYRKSSTWDVYSLDTFEERDNSSSSNNVATKSHEIRPMWKV 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00088 947 Gene3D - 6 115 - -
Accr22g00088 947 FunFam Probable disease resistance protein At1g63360 416 505 - -
Accr22g00088 947 PRINTS Disease resistance protein signature 267 281 - -
Accr22g00088 947 PRINTS Disease resistance protein signature 363 377 - -
Accr22g00088 947 PRINTS Disease resistance protein signature 187 202 - -
Accr22g00088 947 PRINTS Disease resistance protein signature 617 633 - -
Accr22g00088 947 Pfam Rx N-terminal domain 7 90 IPR041118 -
Accr22g00088 947 SUPERFAMILY L domain-like 495 885 - -
Accr22g00088 947 Coils Coil 24 54 - -
Accr22g00088 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 430 IPR027417 -
Accr22g00088 947 Gene3D - 415 503 IPR036388 -
Accr22g00088 947 MobiDBLite consensus disorder prediction 925 947 - -
Accr22g00088 947 PANTHER DISEASE RESISTANCE PROTEIN RP 31 856 IPR044974 GO:0006952
Accr22g00088 947 Gene3D - 329 414 IPR042197 -
Accr22g00088 947 Pfam NB-ARC domain 168 417 IPR002182 GO:0043531
Accr22g00088 947 Gene3D Ribonuclease Inhibitor 504 888 IPR032675 -
Accr22g00088 947 Gene3D - 147 320 IPR027417 -
Accr22g00088 947 CDD RX-CC_like 2 130 IPR038005 -
Accr22g00088 947 Pfam Leucine rich repeat 575 629 IPR001611 GO:0005515
Accr22g00088 947 FunFam Probable disease resistance protein At1g61300 148 318 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00088 187 630 WRKY Transcription Factor Family AT5G45050 22.845 1.46e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00088 K13457 - gmx:100305458 1316.21