Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00084 ATGGCAGCTTGCACAGTGTACACAACACAATCTCTCAACACAAATTGCTCCTTCCCAACTCCATCAAAAGCCCACTTGGGTTTTCACCAAAAACAGGTTCTTTTGTACAGAAGCAGAACCAGCAGTAGAAGTAGCAGCAGCAGGCCATGGGTGATAACATGCGCTGCGGGTGACTCACAGACAGTGGTGATTGGTCTAGCAGCAGACTCAGGATGTGGGAAGAGTACCTTCATGAGGAGGCTTACAAGTGTGTTTGGAGGCACAGCGGAGCCACCAAAAGGAGGGAATCCAGATTCTAACACCCTCATAAGTGACACAACCACAGTGATATGTTTGGATGATTATCACTCACTTGACAGAACAGGAAGGAAGGAAAAGGGAGTCACAGCACTTGATCCAAGAGCCAACAATTTTGATCTCATGTATGAACAAGTTAAGGCCATCAAAGAAGGTATTGCTGTTGAGAAACCCATTTACAACCATGTCACTGGTCTCTTGGACGCACCTGAGCTCATCAAGCCACCCAAGATCTTGGTCATAGAAGGCCTGCACCCGATGTTTGATCCTCGGGTCAGAGAACTATTGGACTTCAGCATCTACTTGGACATCAGCAATGAAGTGAAATTCGCCTGGAAAATTCAGAGAGACATGGCAGAACGTGGGCATAGCCTCGAAAGCATCAAAGCTAGTATCGAAGCGAGAAAACCCGATTTTGACGCATACATTGATCCTCAGAAGCAATATGCTGATGCAGTGATAGAAGTGTTACCAACACAGCTAATACCAGATGATAATGAAGGGAAGATATTGAGAGTGAGATTGATACAGAAAGAAGGGGTTAAGCATTTTAGCCCAGTTTACTTGTTTGATGATGGCTCTACCATTTCATGGATTCCTTGTGGAAGGAAGCTCACTTGCTCTTACCCTGGAATCAAATTCTTCTATGGTCCTGAAACTTACTTTGGTAACGAGGTATCAGTTGTGGAGATGGATGGGCAATTTGACAGACTAGATGAGCTGATATATGTTGAGAGCCATCTAAGCAACTTGTCAACCAAATTCTATGGAGAAGTTACACAACAAATGTTGAAGCATGCCGATTTCCCTGGCAGCAGCAATGGCACAGGTCTCTTCCAAACCATAGTTGGCTTGAAGATCAGAGATCTGTTTGAGCAGATTGTAGCAAGCAGAGCTCAGACACCAGTAAAATCAGCTAAAGCTTAA 1224 0.4461 MAACTVYTTQSLNTNCSFPTPSKAHLGFHQKQVLLYRSRTSSRSSSSRPWVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAIKEGIAVEKPIYNHVTGLLDAPELIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKHFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPETYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSSNGTGLFQTIVGLKIRDLFEQIVASRAQTPVKSAKA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00084 407 PANTHER URIDINE KINASE 45 295 - -
Accr22g00084 407 FunFam Phosphoribulokinase 58 288 - -
Accr22g00084 407 ProSitePatterns Phosphoribulokinase signature. 212 225 IPR006082 GO:0005524|GO:0005975|GO:0008974
Accr22g00084 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 332 IPR027417 -
Accr22g00084 407 PRINTS Phosphoribulokinase family signature 212 229 IPR006082 GO:0005524|GO:0005975|GO:0008974
Accr22g00084 407 PRINTS Phosphoribulokinase family signature 177 195 IPR006082 GO:0005524|GO:0005975|GO:0008974
Accr22g00084 407 PRINTS Phosphoribulokinase family signature 230 253 IPR006082 GO:0005524|GO:0005975|GO:0008974
Accr22g00084 407 PRINTS Phosphoribulokinase family signature 68 85 IPR006082 GO:0005524|GO:0005975|GO:0008974
Accr22g00084 407 CDD PRK 63 352 - -
Accr22g00084 407 Gene3D - 58 292 IPR027417 -
Accr22g00084 407 Pfam Phosphoribulokinase / Uridine kinase family 63 261 IPR006083 GO:0005524|GO:0016301
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00084 115 289 PRT Gene Family AT3G27440 26.966 4.63e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00084 K00855 - gmx:100777515 741.11