Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00080 ATGGCGACTACGGTAAGTAATCACCTCACTTGCAATGAGCCTGAATTCGCGAGCCCTCATACTTGGTATTCACCAGAAACAGGAATTTACACTAGCAAACATGCTCCGTTGGAGCTTCCTTCAGACCCGTTTCTTGATGTTGTTTCTCACATTTTTTCTCAACAACATAATGGGTTTTCAGCCCTCATAGATTCTTCATCTGCATGTTCAATTTCTTACTCGGACTTGTTTCCTCTGGTCAAGTCTACGGCATTTGGTCTCCACAAAATGGGCGTGTCACAAGGTGACGTTGTTCTTCTTCTAATTCCTAATTCCATTTTCTATCCCATTGTTTTCTTGGGTGTTTTGTATCTTGGAGCAATCGTCACACCGTTGAATCCTCGAAGTCACATATCAGAAATCCACAAGCAAATTGCTGAATGTGGTGTGAGTATGGGTTTTACTTCACAGGACAAAGTAAGAGAGCTACAACTATTGGGCATTCCAGTTATTGGAGTCCCTGGAAATTTCAAGGAATGTTCTTCTAACTACTCAGTTTTTTATAACCTTGTTTCTGGTAACTCGGGTTTATTTCCGAGGCCGGTTATTAAACAAGAAGACAAGGCGGCTATATTGTATTCTTCTGGGACTACGGGAGCGAGCAAAGGAGTCGTTTTAACACATAAAAATTTTGTATCTATGGTTGAGCTTTTCGTGAGGTTTGAAGCTTCTCAATATGATTATTCAAGCTCGAAGAATGTGTTCCTAGCTGTTCTGCCAATGTTCCATATATATGGTTTATCACTCTTTGCAACAGGATTACTGTCTTTGGGCTCTACGATTATTGTAATGAAAACATTTGACATCAATGAGGTGATTAAGGTGATTGATAATTACAGAGTCACACACTTCCCTGTTGTTCCACCAATACTGACGGCATTGACAAAGAAGGTAACCAGTATAAATAGGAGCTATCTGCAAAGTTTGATACAGGTCTCCTGTGGTGCAGCACCTTTAAGCATAAAAAATATAGAAGACTTCATCCACACTCTACCTAACGTTGACTTGATACAGGGTTATGGAATGACTGAGTCAACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCAAAATTATTCTTCTATAGGGTTGTTAGCTCCGAACATGGAAGCAAAAGTGGTTGATTGGAAAACTGGTGCTTTTATGCCTACAGGCAGTAGTGGTGAGCTTTGGTTGAGAGGGCCTTCAATCATGAGAGGATACTTGAATAACAAGGAAGCAACAATGTCAACAATTGATAAAGACGGTTGGCTTCACACCGGTGATGTTGCTTGGTTTGATCAAGATGGATACATACATTTGTCTGACCGCTTGAAAGATATTATCAAATACAAGGGCTATCAGATATCTCCTGTGGATCTGGAAGCCTTGTTAATTTTGCATCCCGAGATAGTTGATGTAGCAGTTATTGGTTTCAATGATGAAGAAACAGGGGAGATACCAGTGGCATTTGTGGTTAGGAAGGTTGGAAGTACCCTCTCTCAGGAAGCTATTTTGAATTATGTTGCTCAGCAGGTTGCTCCATACAAAAAGGTGAGGAAAGTGGTGTTCACTGACTCAATACCAAGGTCAGCTGCTGGGAAGATTCTCAAAAGGCAACTGAGGAGGAATTACTTGACTTCTAAACTCTGA 1677 0.4073 MATTVSNHLTCNEPEFASPHTWYSPETGIYTSKHAPLELPSDPFLDVVSHIFSQQHNGFSALIDSSSACSISYSDLFPLVKSTAFGLHKMGVSQGDVVLLLIPNSIFYPIVFLGVLYLGAIVTPLNPRSHISEIHKQIAECGVSMGFTSQDKVRELQLLGIPVIGVPGNFKECSSNYSVFYNLVSGNSGLFPRPVIKQEDKAAILYSSGTTGASKGVVLTHKNFVSMVELFVRFEASQYDYSSSKNVFLAVLPMFHIYGLSLFATGLLSLGSTIIVMKTFDINEVIKVIDNYRVTHFPVVPPILTALTKKVTSINRSYLQSLIQVSCGAAPLSIKNIEDFIHTLPNVDLIQGYGMTESTAVGTRGFNTEKFQNYSSIGLLAPNMEAKVVDWKTGAFMPTGSSGELWLRGPSIMRGYLNNKEATMSTIDKDGWLHTGDVAWFDQDGYIHLSDRLKDIIKYKGYQISPVDLEALLILHPEIVDVAVIGFNDEETGEIPVAFVVRKVGSTLSQEAILNYVAQQVAPYKKVRKVVFTDSIPRSAAGKILKRQLRRNYLTSKL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00080 558 Pfam AMP-binding enzyme C-terminal domain 469 543 IPR025110 -
Accr22g00080 558 Gene3D - 29 454 IPR042099 -
Accr22g00080 558 SUPERFAMILY Acetyl-CoA synthetase-like 55 554 - -
Accr22g00080 558 Gene3D - 455 555 IPR045851 -
Accr22g00080 558 FunFam 4-coumarate--CoA ligase 2 455 556 - -
Accr22g00080 558 CDD 4CL 39 549 - -
Accr22g00080 558 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 24 551 - -
Accr22g00080 558 Pfam AMP-binding enzyme 54 459 IPR000873 -
Accr22g00080 558 FunFam Long-chain-fatty-acid--CoA ligase FadD 31 454 - -
Accr22g00080 558 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00080 18 558 Monolignol Biosynthesis Gene Families AT4G19010 58.318 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00080 K01904 - gmx:100804808 774.237