Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00079 ATGGGTAGCCAGGAAAGCTCATCAATGAGTCTTCCCATCCTCCTCCTACTCACCATCGTCATCTCTTACCTGTTTTTCTGTTGCATCGGTGTGACCGCAGAAACCAACACGCTGAATCAGTCAGACAATCTCAACTTTACCCAACAACTGGTTTCCAACAACAAGAACTTCACCTTAGGATTCGTCAAACCTTTCGTCGACTACGACAACAACAATACATACTTAGCCATTTGGAATTCCAAGTATGAGTCACCTTCATCTCCAGTTTGGATAGCCAACAGAGACACCCCAATCACTAATGCTTCTTTTGCAACTCTCTTCATCCACCAAACCGGAAAGTTCGTCATCAATCGAACTCGTGATGGCCACCCAATTCAACTATGCCCCGGCGGAGAAACCAACAACAACAACAACGTTAACTACAACAACATAAAGGCTGTTTTGTTGGACAATGGGAATCTCGTACTGACAGAAGTGAATTCCAATGGATCTGTGGATCGGACCTTGTGGCAGAGCTTTGATTGTCCCACAGACACACTTTTGCCTGGCATGAAACTGGGCATCAATCACAGAACAGGAAGGAACTGGACTCTCACATCATTTTTGGCTCCAGATGACCCATCTCAAGGAGCTTTTACGCTCGAATGGAACCCTAACAGTCAAGAGCTGGTTGTTCGACGAAGAGGTATGAGTTTTTGGAACAGTGGGATATTGAAAAATGTTAGTGATGACTTAGGTCGAATGACCTTCGAAAACTTAGAGGTGATGGAATCTACGTTAGAGTATAAGTATTATCGGATGAGGTCTAACAAATCTTTGGATGAAGAGGTCTTTAGTTATTCGTTGAAATATGACCCTATGGATCCTTCCACTTATAAAAGCATAAAAATGAGGATAGACTACACCGGTGCCTTTTCCTTTGCTCAGAATGGGTTGGCACTTTCATTAGAGGATTTGTGTTATGGGTATAGTACAGAGAATGGATGTGCAAAATGGAGCCAACCAAAATGTAGGACTGACGAGAATACGAGGTTTGTATTGCGGTCTGGCGGCTTTGCAAATAGGCCTAACTCTGTTGGTGATGGTGGTCATTATGATAAGAATGGAACGATTGGTCTAGCTGATTGTAGAGTTCGTTGTTGGAATGACTGTGATTGCCAGGCATATTCGAAAACTGTTACTGTTGGTTGTTTGACGATAAGCAAAGATACAGAGTTCATACCAGATCCATCCGGACAGGCTGTAAGATTTTATGTTATCCAAAGGCCACAAAACGAAAGGAAAACCAAGAAATGGATTGCAATTTCGGTTTCAGTCTGTGGGGTGTTGTTAGTTTCTGTCACTGTCATTATCTTCTATTGGAGATGGAGAAGAAAAGTGAGAAAAGAGAGAAGACTACTTCAACTAATCACATCAACTGATACTATACACAACGCGAATGAGCTTGAAAATGACAAAGACTTTGCTCAAAATTTGAAAATCTTCAGCTTTGTGTCTATCCTTGAAGCTACAAATAACTTCTCTGTGCAAAATAAGCTCGGACAGGGTGGTTTTGGTCCTGTTTATAAGGGAAAACTAGCAGAAGGAAAAGAAATTGCAGTGAAGAGGCTATCAAAAAGTTCAGGACAAGGATTAGTAGAGTTTAAGAATGAGTTGATACTCATAGCAAAACTACAACACATGAATCTAGTTCGTTTGCTTGGATGTTGTGTACATAATGAAGAGAAGTTGTTAATTTATGAATACATGCCTAACAAAAGCTTGGACTCCTTTCTCTTTGATGCATCCAAGAGAAGTATTTTAAATTGGAGAATGAGAGTGATGATTATTGAAGGGATTTCCCAAGGACTTCTTTATCTTCATCAGCATTCAAGATTAAGAATCATACACAGAGATCTAAAAGTTAGTAACATATTACTCGATGGAGAGATGAATCCTAAAATTTCTGACTTTGGAATGGCGAGGATTTTCAAACGGAGTGAGCTCATTGCAAATACTAACAATCCTGTTGGGACATATGGATATATGTCTCCTGAGTATGCAATGGATGGAATATTCTCTGTGAAATCGGACATTTTCAGCTTTGGTGTCATAATTCTTGAAATTTTAAGTGGCAGGAGGAATAATAGTTTTTATGATACCAAAAAGCCTCTGAATCTAATTGGACATGCTTGGGATTTGTGGGAAAAAGGAGCTGGTTTAGAGTTAATGGATCCAACACTAAGTAATTCATGTTTCAATCAACAATTTCTTAGACTTGTTCAAATTGGTCTTTTATGTGTGGAAGAATCTTCAATAGACAGACCAACCATTTCAGAAGTCATTTCTATGATCACAAATGAAAGTACAATTTTACCCATGGTGAAGAAACCTGCATTTACAAATTTAGATAGCAACATCCACGCAAATCCTCAAAGAAATGACACGGAAAACAATTCCATCAATAATGTGTCCATATCTACTATGAATGGAAGATAG 2478 0.3939 MGSQESSSMSLPILLLLTIVISYLFFCCIGVTAETNTLNQSDNLNFTQQLVSNNKNFTLGFVKPFVDYDNNNTYLAIWNSKYESPSSPVWIANRDTPITNASFATLFIHQTGKFVINRTRDGHPIQLCPGGETNNNNNVNYNNIKAVLLDNGNLVLTEVNSNGSVDRTLWQSFDCPTDTLLPGMKLGINHRTGRNWTLTSFLAPDDPSQGAFTLEWNPNSQELVVRRRGMSFWNSGILKNVSDDLGRMTFENLEVMESTLEYKYYRMRSNKSLDEEVFSYSLKYDPMDPSTYKSIKMRIDYTGAFSFAQNGLALSLEDLCYGYSTENGCAKWSQPKCRTDENTRFVLRSGGFANRPNSVGDGGHYDKNGTIGLADCRVRCWNDCDCQAYSKTVTVGCLTISKDTEFIPDPSGQAVRFYVIQRPQNERKTKKWIAISVSVCGVLLVSVTVIIFYWRWRRKVRKERRLLQLITSTDTIHNANELENDKDFAQNLKIFSFVSILEATNNFSVQNKLGQGGFGPVYKGKLAEGKEIAVKRLSKSSGQGLVEFKNELILIAKLQHMNLVRLLGCCVHNEEKLLIYEYMPNKSLDSFLFDASKRSILNWRMRVMIIEGISQGLLYLHQHSRLRIIHRDLKVSNILLDGEMNPKISDFGMARIFKRSELIANTNNPVGTYGYMSPEYAMDGIFSVKSDIFSFGVIILEILSGRRNNSFYDTKKPLNLIGHAWDLWEKGAGLELMDPTLSNSCFNQQFLRLVQIGLLCVEESSIDRPTISEVISMITNESTILPMVKKPAFTNLDSNIHANPQRNDTENNSINNVSISTMNGR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00079 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Accr22g00079 825 CDD STKc_IRAK 513 780 - -
Accr22g00079 825 PIRSF SRK 6 308 IPR024171 GO:0004674
Accr22g00079 825 PIRSF SRK 315 825 IPR024171 GO:0004674
Accr22g00079 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 472 582 - -
Accr22g00079 825 Gene3D Phosphorylase Kinase; domain 1 481 582 - -
Accr22g00079 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 200 IPR036426 -
Accr22g00079 825 SMART blect_4 41 176 IPR001480 -
Accr22g00079 825 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr22g00079 825 Pfam PAN-like domain 370 401 IPR003609 -
Accr22g00079 825 Pfam Protein kinase domain 508 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr22g00079 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Accr22g00079 825 SMART serkin_6 507 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr22g00079 825 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 128 803 - -
Accr22g00079 825 MobiDBLite consensus disorder prediction 802 825 - -
Accr22g00079 825 Gene3D - 30 174 IPR036426 -
Accr22g00079 825 ProSiteProfiles Bulb-type lectin domain profile. 35 169 IPR001480 -
Accr22g00079 825 Gene3D Transferase(Phosphotransferase) domain 1 583 789 - -
Accr22g00079 825 Pfam D-mannose binding lectin 88 200 IPR001480 -
Accr22g00079 825 SUPERFAMILY Protein kinase-like (PK-like) 489 802 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00079 437 793 Receptor kinase-like Gene Family AT4G23230 49.860 6.01e-118 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr22g00079 Pkinase 7.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00079 - - pcin:129322789 1064.68