Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00077 ATGGCTGGCTTGCAAAACTCATTATTGATCTATCATCTTCACTTTCTCATGCTATTACTCTGTAGACATAATATCATCAGTGTGATTGCAGAAGAAACCAACACTCTGAATCAATCAGACACACTCAACTTCACCAGTTTCTTGGTTTCCAACAACAAGAACTTCAACTTAGGATTCATCCAACCTTTTACTGATGATATCAACAACACTTACTTAGCCATTTGGAGTTCCGTATACAGCTCATCTTCTTTTCCAGTTTGGATCGCCAACAGAGACACCCCAATCACTAATGGTTCTTCTGCAACTCTCTTCATCCACCACACCGGAAAGTTTGTCATCAATCGAACTCACGGCGACCCAATTCAACTATGCCCTGGCCAAGAAACCGGCACCACCACCAACAACAACAACGTTAACTACACTAACACGAAGGCTGTTTTGTGGGATGATGGAAACCTCGTACTGACAGAAGTGAAGTCCAATGGATCTGTCGGTCGGACCTTGTGGCAGAGCTTTGATTGTCCCACAGACACTCTTTTACCAGGCATGAAACTTGGGATCAATCACAGAACAGGAAGGAACTGGTCTCTAACCTCATGGCTAGCTTCTAATGATCCATCTCCAGGAGCTTTCACACTCGCATGGGACCCACATGGATTAGAGCTGGTTCTTCGACGTAGAGGGGTTATTTTTTGGACTAGTGGAACGTTACAAAATGATGATCTTGAAGGTGGATTGACCTTTGGGAACGCAGGACCAACCTTGAATATTACAAAGAAATACAAGTTGATGTATACTAAAACTTCAGATGAAGAGTTCTTCAGTTTTACGTTGAAACCTGATCCTGATGATCCAAAGGGCGTAAAATGGACCATAGGTTACGATGGTTATTTCTGGTTTGGGCAAAAATATGGAAGTTTATTACAGGATTATTGTCTTGGGTACAAGACAGAGATAGATGAGGGATGTGCAGAATGGGAACAACCTCAGTGTAGGATTTATAATACAAAGTTTCAGTTGTTGTATGGTTCCTTCGTGAATAAAAGTGATGGGAGCTATTTTGATGGTGAAGATAGGGAAGGGATTGGTCCTGCTGATTGTAGAGTTAATTGCTGGAATAATTGTGATTGCCAGGCATATCAGAATACAAAAACTTTACGTTGTGTTGAATATCACCAAGATGCAGAGTTTCAACCAGATCCTTCTGAGAATTCGGTTTCACCACAATTTTATTTTATCAAAAAACCACAAATTGGTTTAACTGTTGAGGAAAGGAACAAGAAGAAATGGATTGCAATTTCAGTTTCCATTGCAATATTATTGTTGTTAGCATCTGTTGTTGTTATAATCTGTTATTGGAGAAGGAAAAGGAAAGGGAGAAAAGAGGACCATCTACATCAACTGATGGCAGAAACTAATGATTTGCACAACTCAGATGAGCTTGGATATGATAATGGTTTTTCTCAACATTTGAAAGTTTTTAGCTTTTTGTCTGTCGTTGAGGCTACAAATAACTTTTCAGTAGAAAATAAGCTTGGACAAGGTGGTTTTGGCCCAGTATATAAGGGAAAATTGCCAGAAGGAGAAGAAATTGCAGTAAAAAAGCTATCTAGGAGTTCAGGACAAGGGTTAGTGGAGTTCAAGAATGAGTTAATACTCATAGCAAAGCTACAACACATGAATCTAGTTCGTTTGCTTGGATGTTGCATACAAGCTGATGAGAAGCTATTGGTTTATGAATACATGCCTAACAACAGTTTGGACTCCTTTCTCTTTGATGCATCGAAGAAGGATTTGTTGAATTGGAGGACAAGAGTGATGATTATTGAAGGGATTTCACAAGGACTTCTTTACCTTCATCAACATTCAAGATTAAGAATCATACACAGGGATTTGAAAGCCAGTAATATATTACTCGATGCTGACATGAATCCTAAAATTTCCGACTTTGGAATGGCTAGAATTTTCAAACGGAATGAACTCATTGCCAACACTAGCAGGATTGTTGGAACATATGGTTACATGTCCCCTGAATACGCAATGGAGGGGGTGTTCTCCATAAAATCGGATATATTCAGTTTTGGAGTCGTAATCCTTGAAATTTTAAGCGGCAAGAGAAACAACAGCTTTTATGATGTAAATAAACCTACGAATTTAGTAAAACATGCTTGGGATTTGTGGCAAAATGGGGTTGGCTTAGAACTAATGGATCCAACATTCAATGATTCATGTTCCACTCAACAATTTCTTAGATTTATTCATATAGGTTTGTTGTGCGTGGAAGAATGTCCAGCAGATAGACCAACTACTTCAGAAGTCATTTCTATGATCACAAATGAAAGTATCATTTTGCCTATAGTGAAGAAACCTGCATTTGCAAATTTAGACAATGTCACCGATGTAGACTCTCATAAGGCAAACCTAGAATACCATTCCTTCAACAATGTGTCAGTATCCACTATGAATGGAAGATAG 2475 0.3891 MAGLQNSLLIYHLHFLMLLLCRHNIISVIAEETNTLNQSDTLNFTSFLVSNNKNFNLGFIQPFTDDINNTYLAIWSSVYSSSSFPVWIANRDTPITNGSSATLFIHHTGKFVINRTHGDPIQLCPGQETGTTTNNNNVNYTNTKAVLWDDGNLVLTEVKSNGSVGRTLWQSFDCPTDTLLPGMKLGINHRTGRNWSLTSWLASNDPSPGAFTLAWDPHGLELVLRRRGVIFWTSGTLQNDDLEGGLTFGNAGPTLNITKKYKLMYTKTSDEEFFSFTLKPDPDDPKGVKWTIGYDGYFWFGQKYGSLLQDYCLGYKTEIDEGCAEWEQPQCRIYNTKFQLLYGSFVNKSDGSYFDGEDREGIGPADCRVNCWNNCDCQAYQNTKTLRCVEYHQDAEFQPDPSENSVSPQFYFIKKPQIGLTVEERNKKKWIAISVSIAILLLLASVVVIICYWRRKRKGRKEDHLHQLMAETNDLHNSDELGYDNGFSQHLKVFSFLSVVEATNNFSVENKLGQGGFGPVYKGKLPEGEEIAVKKLSRSSGQGLVEFKNELILIAKLQHMNLVRLLGCCIQADEKLLVYEYMPNNSLDSFLFDASKKDLLNWRTRVMIIEGISQGLLYLHQHSRLRIIHRDLKASNILLDADMNPKISDFGMARIFKRNELIANTSRIVGTYGYMSPEYAMEGVFSIKSDIFSFGVVILEILSGKRNNSFYDVNKPTNLVKHAWDLWQNGVGLELMDPTFNDSCSTQQFLRFIHIGLLCVEECPADRPTTSEVISMITNESIILPIVKKPAFANLDNVTDVDSHKANLEYHSFNNVSVSTMNGR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00077 824 SUPERFAMILY Protein kinase-like (PK-like) 487 788 IPR011009 -
Accr22g00077 824 Gene3D Transferase(Phosphotransferase) domain 1 582 783 - -
Accr22g00077 824 PIRSF SRK 5 302 IPR024171 GO:0004674
Accr22g00077 824 PIRSF SRK 310 824 IPR024171 GO:0004674
Accr22g00077 824 CDD STKc_IRAK 512 779 - -
Accr22g00077 824 SMART serkin_6 506 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr22g00077 824 Pfam Protein tyrosine and serine/threonine kinase 508 713 IPR001245 GO:0004672|GO:0006468
Accr22g00077 824 Gene3D - 26 173 IPR036426 -
Accr22g00077 824 SMART blect_4 33 175 IPR001480 -
Accr22g00077 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 785 - -
Accr22g00077 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Accr22g00077 824 ProSiteProfiles Protein kinase domain profile. 506 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr22g00077 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 206 IPR036426 -
Accr22g00077 824 ProSiteProfiles Bulb-type lectin domain profile. 33 168 IPR001480 -
Accr22g00077 824 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 135 797 - -
Accr22g00077 824 Gene3D Phosphorylase Kinase; domain 1 466 581 - -
Accr22g00077 824 Pfam D-mannose binding lectin 86 200 IPR001480 -
Accr22g00077 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 467 581 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00077 435 792 Receptor kinase-like Gene Family AT4G23230 52.793 3.77e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr22g00077 PK_Tyr_Ser-Thr 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00077 - - pcin:129322789 1197.57