Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00061 ATGGAATCTATGATGACAAGGTCTCGTGTTTTTTTTGTGATTGTTGTCTCTGTACTTTCTCTCCAGACTGTTAGATCAAGAGATGACGATGCCCAAGCACTTTTAGCACTCAAATCCTCTATTGATGTTCACAATACACTTCCATGGTCACCCGGAAGCAAAAGTCTCTGCGACTGGGAAGGAGTCAGAGATTGCTTCAATGGAAGAGTCCGAAAGCTAGTGCTTGAGAACTTGAACTTAACAGGTAATTTGGACCCAAAGATCTTGAACCGACTGGATCAAATTCGAGTACTCAGTTTCAAGGGCAACTCACTATCTGGTCCAATCCCAGACCTCTCTGCCCTGGTTAATCTCAAATCCATATTTCTCAACGACAACAGCTTCTCCGGCGTCTTCCCTGCCTCCATTTCCGGTCTCCACCGCGTTAAAGTCATAGTTCTTTCTGGCAACCGACTCTCTGGTAATATCCCGTCGTCGCTTCTCAAACTCCGGCATCTCTACATGCTTTACTTGCAAGACAACTCGTTCACAGGACCCATCCCGGGTCTCAACCAAAGCAGTCTCCGGTACCTGAACGTCTCCAACAACCAACTTTCTGGCGCGATCCCGGCAAGCTCGGCGTTGATCCGTTTCAACGAGTCGTCGTTTTTGGGGAACCCGGGCCTGTGTGGGGAACAGATCCTCAAGGCATGCGAAATGCCTCCGTCAGTAAGCCCGGCTTATCCGTTGGTGCCAAGTAGGACGGAACCTGAACCAAGGTCGTCGTCATCTAAACGGAGGAAAGTGATAAAGATAGTAGGAGGGACCATCGGAGGCTTTGCGGTGCTTGTGATATGCTTGGTTGTAACATGTATAATGTGTAGGAATCAGGGAGAAGAGAAGGGTTCAAGAAGCAGGAAGAAAGAAGGAGAAGAGGGGGGAGGAAGAGAGACAGGAGCAGGAACGGGAGGTGAAAGTGGCAGAGGAGGTAATAATGGGGGAAAAGAAGGGGGTTTTTCATGGGAAGACGAGGGACTAGGGAAGTTGGTGTTCTGCGGGACAGGGGATAGTTATATGTTGGAGGATTTACTGAAGGCGTCGGCGGAGACATTGGGGAGGGGTAGTATGGGAAGTACATACAAGGCAGTGATGGAGTCAGGGTTTATAGTGACGGTGAAGAGGTTGAAGGACGCGAGGTATCCTCGCATGCAGGAATTCTCAGCTCACATAGAGTTGCTAGGCAGGCTTAGGCACCCTAATCTGGTCCCACTTCGAGCTTACTTCCAGGCTAAGGAGGAACGCCTTCTTGTTTATGATTACTTCCCCAATGGCAGCCTCTTCTCTCTCGTCCATGGATCAAAAACTTCTGGTGGGGGAAAGCCTCTTCACTGGACATCATGCCTCAAAATTGCCGAAGACCTAGCAACTGGACTTGTGTACATCCACCAGAATCCTGGCCTAACCCATGGCAACCTGAAATCTTCCAATGTGTTGTTGGGTTCGGACTTCGAGTCATGTCTTACAGATTATGGCCTCCAGGTGTTGCTTAATCCAGATTCACTCGAAGAACCCAGCGCCACCACATTATTCTACAGAGCACCGGAGTGTCGTAACAACCGAGGGCCTCCCACTCAGCAAGCTGATGTTTACAGCTTTGGGGTACTTGTCCTGGAGCTTTTAACCGGTAAAACACCCTTCCAAGACCTTGTTATGGAACATGGTTCGGATATACCTAGGTGGGTTCGGTCGGTGCGGGAAGAAGAGACAGAGTCCGGGTCTGGGGATGACCCTGCCTCAGGAAATGACGCCTCAGAAGAGAAGCTTCAAGCTCTTTTGAACATTGCCATGACTTGTGTTTCACTGGTACCAGAAAACAGGCCAACAATGAGACAAGTTTTAAAGATGATAAGAGATGCAAGAGCGGAGGCTCAACTGTCCTCAAACAGCAGCGATCATTCTCCAGGAAGATGGTCAGATACTGTGCAGAGCTTGCCTCGTGAAGAGCATTTGAGCATATGA 1998 0.4925 MESMMTRSRVFFVIVVSVLSLQTVRSRDDDAQALLALKSSIDVHNTLPWSPGSKSLCDWEGVRDCFNGRVRKLVLENLNLTGNLDPKILNRLDQIRVLSFKGNSLSGPIPDLSALVNLKSIFLNDNSFSGVFPASISGLHRVKVIVLSGNRLSGNIPSSLLKLRHLYMLYLQDNSFTGPIPGLNQSSLRYLNVSNNQLSGAIPASSALIRFNESSFLGNPGLCGEQILKACEMPPSVSPAYPLVPSRTEPEPRSSSSKRRKVIKIVGGTIGGFAVLVICLVVTCIMCRNQGEEKGSRSRKKEGEEGGGRETGAGTGGESGRGGNNGGKEGGFSWEDEGLGKLVFCGTGDSYMLEDLLKASAETLGRGSMGSTYKAVMESGFIVTVKRLKDARYPRMQEFSAHIELLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLVHGSKTSGGGKPLHWTSCLKIAEDLATGLVYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLQVLLNPDSLEEPSATTLFYRAPECRNNRGPPTQQADVYSFGVLVLELLTGKTPFQDLVMEHGSDIPRWVRSVREEETESGSGDDPASGNDASEEKLQALLNIAMTCVSLVPENRPTMRQVLKMIRDARAEAQLSSNSSDHSPGRWSDTVQSLPREEHLSI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00061 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 635 IPR046959 -
Accr22g00061 665 ProSiteProfiles Protein kinase domain profile. 358 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr22g00061 665 MobiDBLite consensus disorder prediction 293 332 - -
Accr22g00061 665 SUPERFAMILY L domain-like 28 224 - -
Accr22g00061 665 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Accr22g00061 665 MobiDBLite consensus disorder prediction 293 308 - -
Accr22g00061 665 Gene3D Transferase(Phosphotransferase) domain 1 434 652 - -
Accr22g00061 665 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Accr22g00061 665 Gene3D Phosphorylase Kinase; domain 1 351 433 - -
Accr22g00061 665 FunFam Nuclear pore complex protein NUP107 27 182 - -
Accr22g00061 665 MobiDBLite consensus disorder prediction 636 665 - -
Accr22g00061 665 SUPERFAMILY Protein kinase-like (PK-like) 362 629 IPR011009 -
Accr22g00061 665 MobiDBLite consensus disorder prediction 239 259 - -
Accr22g00061 665 MobiDBLite consensus disorder prediction 574 595 - -
Accr22g00061 665 Pfam Protein kinase domain 361 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr22g00061 665 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Accr22g00061 665 Gene3D Ribonuclease Inhibitor 185 234 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00061 4 665 Receptor kinase-like Gene Family AT1G60630 61.437 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr22g00061 Pkinase 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00061 - - gmx:100809866 919.842