Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00054 ATGGATAATAAACCAAAGTCCGATCAGGTTGTTCTCTTCATCGACCACCTCAACGCTAGCCCTCCTTCTACGGAAACTCATCCCAACAACATCAACACCACCACCAACAAGCCCAAACTCACTTCTAGAGTCAAGACCCTCAATCGCCTCAGCTTCTCCAAACCCAAATCTCGCATCCAAGAACACAACTACCCACTACTCTACACCAACTTCGCCGTCCCTGAAGAAGCCCAAGATCCTTCCTGGTATTCTTCCACTGACGACGACGAAGAAGAAGAAGAAGAAGACGAAGACCAGGCTGAGGAGGAGGACGGCCCTAAGTCCCACAAGAAAAGCAAACGTCGTCGTCGTCGCAAGATTCAATGGAAGCGCGTGCTAGAATGGGCCTTGTTCATCATCATATTAACAAGCTTGGTCTCCTGCATCACCATTCCTTCCATCAAAGCCAAGCACAAGTGGGGTTTAGAGATTTGGAAATGGTGCTTGATGGGAATGGTCACCTTCAGCGGCCGCTTAGTCTCCGGCTGGCTTGTTGCCGTCGCCGCCTTCATCATAGAACGAAACTTCATGCTCAGAGAAAAAGTTTTATACTTCATTTACGGTCTCAGAAAAAGCATCAGAAACTGCATATGGCTTGGCCTCGTCTTATTCTCTTACTGGACCGTCGTCTTTGACAGCATCCAGAGAAAAAACCACAAGTTCCTTAACAAGGTGTTTCAGGCCCTCGTCGCTGTTCTCGTCGGAGCAATAATCTGGCTCGTAAAGATCGTGCTGGTGAAAATGCTAGCCTCGTCGTTCCACGTTACGACCTACTTTGACAGAATGAAAGAGAGCGTGTTCCATCACTATATATTGGATTCACTCTCGGGGCCTCCATTGGAGGAGAACGAGGAGTCGCAGCTTACTCTGAGGGCGTCAAAGTCGATGCCGGCGAACTGGAAGGGGAGGAACAAGGCGAAGAACTTTTACAAGTTGAACAGGTTCGGGTCGAGGAAGATCGATATGGAGAAGCTGAAAGAACTGAGCATGGAGAGCAGGGCGTCGGCGTGGAGCGTAAAGAGGCTGGTCAACTACGTGAGGTCGTCGGGGCTGTCGACGATTTCTCGGACCGTCGACGATTTTGGGAACGCCGAGTCGGAGATCTCTAGTGAGTGGGAAGCTAGAAATTGTGCACAGAGGATTTTCAAGAACGTCGCTAAACCTGGTGCCAAGTATATTGAAGAGGAGGATCTCCTGAGATTTTTGAAAAGAGTTGAAGTTCATACTATATTCCCGCTCTTCGAAGGCGCCCTCGAAACTGGAAAGATCTCTAGGTCTTCATTTAGAAATTGGGTGATTCGAGCATATTATGAAAGGAAGGCTCTAGCACAATCACTGAACGACACGAAAACTGCAGTGCAACAGCTTCACAAGCTAGCAAGCTCAATAGTGATAGTGATAATCATTATAGTGTTCCTTTTGGTGATAGAGCTGGCTACTATCAAGGTAGTACTTTTCGTCATCACACAAATAGTTCTTCTTGGTGTTGCCTTCCAGGGCACCTGCAAGACTGTGTTGGAGGCCATCATCTTCGTCTTCGTCATGCACCCCTTCGACATTGGTGATCGCTGTGTAATCGACGATGTTCACATGATTGTGGAAGAGATGAATATCTTGACAACTGTGTTTCTTCGATACGACAATGAGAAAATCTACTACCCCAACGCGGTTTTGCTCAACAAGCCAATAAGCAATTTCTATAGGAGCCCAGAGATGTGGGATTCTATTGACTTCGTTATTGATGTTTCAACACCTATGGAGATCATCATTTCACTCAAGAAAGCTATTCAAACGTACATAGAGAGCAAGCCGAAGTATTGGAATCCAAAGCACGCGGTGATAGCGAAGGAGATAGAGAATGTGCATAAGCTGAAGCTGTGTCTGTGTGTGCAACACACAATAAACCATCAGAACTATGGGGAGAGAAACAATCGGATCACGGAGCTTCTGATGGAGCTGAAGAAGATCTTCGAGGTTCATGGAGTTAAGTACAATCTTCTCCCTCAGGAGGTCCACATTACCAAGATGAACAGTACCCAAAATGGGAGGCCTGTCTTGTAA 2100 0.4695 MDNKPKSDQVVLFIDHLNASPPSTETHPNNINTTTNKPKLTSRVKTLNRLSFSKPKSRIQEHNYPLLYTNFAVPEEAQDPSWYSSTDDDEEEEEEDEDQAEEEDGPKSHKKSKRRRRRKIQWKRVLEWALFIIILTSLVSCITIPSIKAKHKWGLEIWKWCLMGMVTFSGRLVSGWLVAVAAFIIERNFMLREKVLYFIYGLRKSIRNCIWLGLVLFSYWTVVFDSIQRKNHKFLNKVFQALVAVLVGAIIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYILDSLSGPPLEENEESQLTLRASKSMPANWKGRNKAKNFYKLNRFGSRKIDMEKLKELSMESRASAWSVKRLVNYVRSSGLSTISRTVDDFGNAESEISSEWEARNCAQRIFKNVAKPGAKYIEEEDLLRFLKRVEVHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASSIVIVIIIIVFLLVIELATIKVVLFVITQIVLLGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDDVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLNKPISNFYRSPEMWDSIDFVIDVSTPMEIIISLKKAIQTYIESKPKYWNPKHAVIAKEIENVHKLKLCLCVQHTINHQNYGERNNRITELLMELKKIFEVHGVKYNLLPQEVHITKMNSTQNGRPVL 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00054 699 Coils Coil 83 103 - -
Accr22g00054 699 MobiDBLite consensus disorder prediction 19 39 - -
Accr22g00054 699 PIRSF Memb_At2g17000 13 697 IPR016688 -
Accr22g00054 699 SUPERFAMILY Sm-like ribonucleoproteins 521 579 IPR010920 -
Accr22g00054 699 Pfam Mechanosensitive ion channel 472 676 IPR006685 GO:0016020|GO:0055085
Accr22g00054 699 Gene3D - 530 579 IPR023408 -
Accr22g00054 699 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 27 693 IPR016688 -
Accr22g00054 699 FunFam Predicted mechanosensitive ion channel 530 579 - -
Accr22g00054 699 MobiDBLite consensus disorder prediction 18 39 - -
Accr22g00054 699 MobiDBLite consensus disorder prediction 82 102 - -
Accr22g00054 699 MobiDBLite consensus disorder prediction 78 113 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00054 5 690 Mechanosensitive Ion Channel Family AT5G12080 43.329 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00054 K22048 - gmx:100813521 999.964