Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00048 ATGGAGTTCAGTGAGCATGAGAGCGTGACAGTTCGAGAAGTCTGTGCAAATGGAAGTTGCACGGGAACATCTGAAGTTGAAGCAAGGCTTGATGAAGGAGATATTCAAGAGGCAGAATCTTCATTGCGAGAAGGGTTATCTCTCAATTTTGAGGAAGCAAGAGCACTTCTGGGGAAGTTGGAGTATCAGAGAGGGAATGTGGAAGGTGCTCTTCGTGTATTTGATGGGATTGATCTCCAAGCTGCCATACAGCGATTACAACCTTCCCTTCCTGAAAAACCATTTACCAAGAAGGGGCGCAATCGTTCTGAACCACCTCCTTCAGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAAGCGCGTTCCCTACAAACTCTAGGGAGATTAACTGAAGCTGCAAATGAATGCAAAAGTGTGCTTGATGCTGTTGAGAAGATATTTTATCAGGGTATACCCGATATTCAAGTGGACAATAGATTGCAAGAGATAGTCAGCCATGCTGTAGAGCTCCTGCCAGAGCTTTGGACACAGGCTGGTTGCTATCAAGAGGCAATATCTGCCTATAGGCGTGCCCTTCTTAGTCATTGGAATCTAGATAATGATTGCTGTGCAAGAATCCAGAAAAATTTTGTTGTATTTTTGTTGTACAGTGGGGTAGAGGCTAGCCCACCCAGTTTTGGGGTTCAGATTGATGGATCTTATGTACCCAAAAATAATTTGGAAGAGGCAATTCTGCTTCTTATGATTCTTATCAGAAAGTTTTGCATTGGTAAGGCCAAATGGGACCCATCAGTGATGGAGCACCTGACTTTTGCACTTTCTGTATGTGGCCAAACGTCTGTTTTGTCCAAGTCACTTGAAGAGCTAATGCCTGGAGTATATAGTCGGATTGATCGTTGGAATTATTTAGCTTTATGTTATAGAGGAGCTGGTCTTAACAAAAGTGCTTTGAATCTACTGCGGAGGACTCTGGAGAATCATGCTCGACCAGACGAGGTTATGTCACTGCTATTGGCTGCCAGGATCTGCAGTGAGGATCCTCAACTTGCTCCTGAGGGAGTAGGTTATGCACAAAGGGCAATCACTAGTGCTCAGGGACCAGATGAGCATCTTAAAGGAGTGGGTCTCCGAATGTTGGGACTTTGTCTTGGAAGGCAAGCTAAGGCTGCTTCCTCTGACTCTGAGAGGTCTCACCTTCAGTCCAAAGCTTTGAAATCATTGGAAGAGGCAGCGAGATTGGAGCCAAAAAATTCTGATCTGACTCTTGAGTTGGCTGTTAAATATGCAGAGCACCGAAATTTGACAACTGCTTTGTGCTATGCAAAGAAATTCTTTGATGAAACAGGTGGCTCTGTATTAAAAAGTTGGAGAATGCTTGCTCTAGTTTTGTCTGCTCAACAAAGATTTTCAGAGGCTGAGGTGGTAATAGATGCAGCTCTTGATCAAACTACAAAATGGGAACAGGGGCCACTACTTAGGCTGAAAGCAAAGCTGAAGATCTTCCAATCACAGCACACAGATGCTATTGAAACATATCGGTACCTCCTTGCATTGGTTCAAGCCCAGAAAAAATCCTTTGGTTCACTCTTTACTAATTCACAGGTTGATGATGGTAAAGTAAACGAATTTGAGATTTGGCACGGTCTGGCAAGTCTATATGCTAGTCTTTCTCATTGGAGAGACGCTGAAATATGTTTGCAAAAGGCCAAAGTGTCGAAGCCCTATTCTGCAGCATTAATGCACACCAAAGGTGTAATTTTCGAAGGACGTGAAGAAGATCGAGCTGCACTTGGTGCTTTCTTTAGTGCATTCATGCTTGATCCAAGCTATGTTCCAAGCAAGATCTTGTTGGGTTCTCTGATGGTAAAACTCGGTTCAAAGGGTTTGCCTGTGGCTAGAGGCTTACTTTCTGAAGCTCTAAGAATAGACCCCACTAACCACAAGGCTTGGTATTATATGGGTATGGTTCACAAAAAGGATGGCCGGATGAGTGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTAGAAGAGTCGGATCCGATCGAAAGTTTCAGCTCTGTTCTTTGA 2085 0.4408 MEFSEHESVTVREVCANGSCTGTSEVEARLDEGDIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSLPEKPFTKKGRNRSEPPPSVSQHAASLVLEAIYLKARSLQTLGRLTEAANECKSVLDAVEKIFYQGIPDIQVDNRLQEIVSHAVELLPELWTQAGCYQEAISAYRRALLSHWNLDNDCCARIQKNFVVFLLYSGVEASPPSFGVQIDGSYVPKNNLEEAILLLMILIRKFCIGKAKWDPSVMEHLTFALSVCGQTSVLSKSLEELMPGVYSRIDRWNYLALCYRGAGLNKSALNLLRRTLENHARPDEVMSLLLAARICSEDPQLAPEGVGYAQRAITSAQGPDEHLKGVGLRMLGLCLGRQAKAASSDSERSHLQSKALKSLEEAARLEPKNSDLTLELAVKYAEHRNLTTALCYAKKFFDETGGSVLKSWRMLALVLSAQQRFSEAEVVIDAALDQTTKWEQGPLLRLKAKLKIFQSQHTDAIETYRYLLALVQAQKKSFGSLFTNSQVDDGKVNEFEIWHGLASLYASLSHWRDAEICLQKAKVSKPYSAALMHTKGVIFEGREEDRAALGAFFSAFMLDPSYVPSKILLGSLMVKLGSKGLPVARGLLSEALRIDPTNHKAWYYMGMVHKKDGRMSDAADCFQAASMLEESDPIESFSSVL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00048 694 PANTHER PROTEIN NPG1 5 691 IPR043376 -
Accr22g00048 694 Gene3D Tetratricopeptide repeat domain 25 224 IPR011990 GO:0005515
Accr22g00048 694 Gene3D Tetratricopeptide repeat domain 239 534 IPR011990 GO:0005515
Accr22g00048 694 SMART tpr_5 458 491 IPR019734 GO:0005515
Accr22g00048 694 SMART tpr_5 548 581 IPR019734 GO:0005515
Accr22g00048 694 SMART tpr_5 302 335 IPR019734 GO:0005515
Accr22g00048 694 SMART tpr_5 652 685 IPR019734 GO:0005515
Accr22g00048 694 SMART tpr_5 118 151 IPR019734 GO:0005515
Accr22g00048 694 SMART tpr_5 582 615 IPR019734 GO:0005515
Accr22g00048 694 SUPERFAMILY TPR-like 118 443 IPR011990 GO:0005515
Accr22g00048 694 SUPERFAMILY TPR-like 406 678 IPR011990 GO:0005515
Accr22g00048 694 Gene3D Tetratricopeptide repeat domain 538 687 IPR011990 GO:0005515
Accr22g00048 694 ProSiteProfiles TPR repeat profile. 652 685 IPR019734 GO:0005515
Accr22g00048 694 MobiDBLite consensus disorder prediction 90 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00048 2 694 Calmodulin-binding Proteins AT2G43040 72.206 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00048 K21843 - gmx:100814609 1038.1