Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00047 ATGGGTAATCCGCAGAACACGAAGGCCGGCGACGACCTCCACGCGGCCGCAAGATCCGGTGACCTCAACGCTGTTCAGGCAATTTTGGGTACCAACCCTTTGGCCATCAATTCCAGAGATAAGCACTCTCGAACACCACTACATTTAGCAGCATGGTCTGGGCAATCAGAAGTAGTCAATTATCTCTGCAAGCACAAGGCTGATGTTGGTGCTGCTGCCATGGATGACATGGGAGCATTACACTTTGCTGCACAGAAGGGACATTTAGACATTGTTCGTGCCCTAGTCTCAGCCGGGGCGTCCGTCAAGGCTTCCACACGCAAAGGCATGACTGCGCTTCATTATGCTGCTCAGGGGCCCCATCTTGAACTTGTCAAGTACTTGGTGAAGAAAGGGGCAAACCTTGGTGCCAAGACAAGGGCCGGAAAGACCCCTTTGGATCTCACTGCCAATGAAGAGGTTCGTTCATTTCTAGAGGAACGTGAAAGGTTGGGAAAGAGTGGAGAATCAAGCAAGAAAGAGAAAGCTGAAGAAGGTGATTTAAAACCATCCACACCTGGACCTGAGGAGAATTCTGGTGCGGAATCTCCTTGTCCAGTTGCCAATGAAGAAAATAGTGATGGAAATAAGAGGAAGGGTGATGAAGATGATGCAAGAGAAGAAGTCTCACCACAGCCAAAGAAGGCTCGGGTTAAGTTAAGCCATCTTCAAAGTTCGGATGATGCCCAAGAAGAAGAGGTGTAG 744 0.4946 MGNPQNTKAGDDLHAAARSGDLNAVQAILGTNPLAINSRDKHSRTPLHLAAWSGQSEVVNYLCKHKADVGAAAMDDMGALHFAAQKGHLDIVRALVSAGASVKASTRKGMTALHYAAQGPHLELVKYLVKKGANLGAKTRAGKTPLDLTANEEVRSFLEERERLGKSGESSKKEKAEEGDLKPSTPGPEENSGAESPCPVANEENSDGNKRKGDEDDAREEVSPQPKKARVKLSHLQSSDDAQEEEV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00047 247 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Accr22g00047 247 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Accr22g00047 247 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Accr22g00047 247 MobiDBLite consensus disorder prediction 161 184 - -
Accr22g00047 247 Gene3D - 112 164 IPR036770 -
Accr22g00047 247 Pfam Ankyrin repeats (3 copies) 77 138 IPR002110 GO:0005515
Accr22g00047 247 Pfam Ankyrin repeats (3 copies) 13 70 IPR002110 GO:0005515
Accr22g00047 247 Gene3D - 6 111 IPR036770 -
Accr22g00047 247 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Accr22g00047 247 MobiDBLite consensus disorder prediction 205 241 - -
Accr22g00047 247 SUPERFAMILY Ankyrin repeat 13 152 IPR036770 -
Accr22g00047 247 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Accr22g00047 247 ProSiteProfiles Ankyrin repeat region circular profile. 42 69 - -
Accr22g00047 247 MobiDBLite consensus disorder prediction 161 247 - -
Accr22g00047 247 PANTHER ANKYRIN REPEAT PROTEIN 3 172 - -
Accr22g00047 247 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Accr22g00047 247 PRINTS Ankyrin repeat signature 124 138 IPR002110 GO:0005515
Accr22g00047 247 SMART ANK_2a 42 71 IPR002110 GO:0005515
Accr22g00047 247 SMART ANK_2a 8 38 IPR002110 GO:0005515
Accr22g00047 247 SMART ANK_2a 75 104 IPR002110 GO:0005515
Accr22g00047 247 SMART ANK_2a 108 137 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00047 3 161 Ion Channels AT2G26650 31.737 7.12e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00047 - - lang:109349041 319.316