Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00037 ATGGTTAAGCATAACAATGTTATCCCAAGTAGTCACTTCAGGAAACATTGGCAAAACCGTGTGAAGACATGGTTCAATCAGCCAGCAAGGAAGACAAGGAGACGCTTAGCTCGGCAAGAAAAAGCTGTTAAGATTTTCCCTAGGCCCACAGCTGGAACTCTTAGACCCGTTGTTCATGGGCAAACTCTGAAATACAACATGAAAGTCAGAGCTGGCCGAGGTTTTTCCCTAGAAGAACTTAAGGCTGCAGGCATTCCTAAAAAGCTTGCCCCAACCATTGGCATTGCTGTTGATCATCGTCGTAGAAACCGTTCTCTAGAAAGTCTTCAGACCAATGTCCAGAGGCTGAAAACATACAAGGCTAAGTTGGTTGTGTTCCCAAGGCGTGCACGCAAGTTCAAGGCTGGTGATTCGGCTGCTGAGGAACTTGCCAATGCTACTCAAGTGCAGGGACAATTCTTGCCAATTGTGAGGGAGAAGCCATCTGTTGAGCTTGTGAAGGTCACAGATGAAATGAAGGCATTTGATGCTTATAAGAAGCTCCGTGTTGAACGCACAAATGCTCGCCATGTTGGCGTCAGGCTAAAGAGGGCTGCTGAAGCAGAAAAGGAGGACAAGAAGTGA 624 0.4679 MVKHNNVIPSSHFRKHWQNRVKTWFNQPARKTRRRLARQEKAVKIFPRPTAGTLRPVVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQTNVQRLKTYKAKLVVFPRRARKFKAGDSAAEELANATQVQGQFLPIVREKPSVELVKVTDEMKAFDAYKKLRVERTNARHVGVRLKRAAEAEKEDKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00037 207 ProSitePatterns Ribosomal protein L13e signature. 70 84 IPR018256 GO:0003735|GO:0005840|GO:0006412
Accr22g00037 207 FunFam 60S ribosomal protein L13 166 207 - -
Accr22g00037 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
Accr22g00037 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Accr22g00037 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 IPR001380 GO:0003735|GO:0005840|GO:0006412
Accr22g00037 207 Gene3D - 167 207 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00037 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 82.723 4.14e-120 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00037 K02873 - pop:18094068 358.607