Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00035 ATGGCCGGCGAAGATTCTGCCCTCTTCAGCACCAACGTCTCCGTCGTACTTGTCGCCTTGGGCTCCGCCGCCTTGGTCGTCACAATGTACCATCTAATTGCCGTTTGCGTCTGCGGCCACCATCCCACTGAACCTAACTCTGACCAGCCGCCTAATGGCGATATTGAGGTGTCCTCGAGCATCATCGACGAGAATTCTTTGGCGCAGCTAATTCCGGCACACAGGTACAAGAAGAAGATCGACGGCGACGGCGATAGTCGCGAGATGACCTGTGCGGTGTGCTTGGGAGATTTCGAGGAAGGCGAAGAGGTGAGAACGTTGCCGGAGTGCTTGCACTCTTTTCACGCGCCTTGCATCGATACGTGGCTCTTGTCTCACCCGAATTGTCCCGTCTGCCGCGCCGATGCCACGCCGTCTCCGGTGGTTCTAAGCACCGTGTCGGAGCCTGTTGCTGGTGAATCGAATTCGATGTTGATTGACCAACGGATAAATATTGTGCAAAATGCTTTGATGCAGAGTGTCATGTTGGGACGGTGA 537 0.5512 MAGEDSALFSTNVSVVLVALGSAALVVTMYHLIAVCVCGHHPTEPNSDQPPNGDIEVSSSIIDENSLAQLIPAHRYKKKIDGDGDSREMTCAVCLGDFEEGEEVRTLPECLHSFHAPCIDTWLLSHPNCPVCRADATPSPVVLSTVSEPVAGESNSMLIDQRINIVQNALMQSVMLGR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00035 178 Pfam Ring finger domain 90 133 IPR001841 -
Accr22g00035 178 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 137 IPR044675 -
Accr22g00035 178 SMART ring_2 91 132 IPR001841 -
Accr22g00035 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 140 IPR013083 -
Accr22g00035 178 CDD RING-H2_EL5-like 91 133 - -
Accr22g00035 178 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
Accr22g00035 178 SUPERFAMILY RING/U-box 84 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00035 20 156 C3H Transcription Factor Family AT5G17600 41.333 1.12e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00035 - - aip:107639941 155.992