Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr22g00019 ATGAAGCAGCCATCGAAATCGAGGCCATGGAGGCCACTCACGGCCAATTGCTGCTCCACGAAGGACCAAACCAAGATCGGAAACTTCATTCGATGCAAGCCGACTTCACGGTCGGATTTGTCCAAGGACGTTGCTCCGATGCCGTCGTTCCGGAGGCTGTCGTTCTCTGATCTGAGCCGGTCGTCGTCGATGCGAATCAACGAGGATCTGGCGCAGTCGTTCGGGTCGGATCTACACGATTTTCAGCTGAGCGAATTGAGAGCCATAACCCAGAATTTCTCGAGCAATTTCTTGTTGGGAGAAGGAGGGTTCGGGACTGTGCATAAGGGCTACATCGATGGTAACTTCCGGCAAGGGTTGAAGGCTCAGCCCGTCGCCGTTAAGCTTCTCGACATTGAAGGCTTGCAAGGACACCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGGCAGCTAAGGCACCCAAACTTGGTGAAGTTGATAGGATATTGTTGTGAAGAAGAAGAACGGCTCCTTGTGTACGAGTTCATGCCAAGAGGAAGCTTGGAGAATCACTTGTTCAGAAGGATTTCATCACTGCCTTGGGCAACAAGATTGAAAATTGCAATAGGTGCTGCTAAAGGCCTTTCCTTCCTGCATGGCGCAGAGAATCCAGTCATTTACAGGGACTTTAAAACTTCTAATGTCTTGCTTGATTCTGATTTCACAGCAAAGTTGTCAGATTTTGGATTAGCCAAAATGGGGCCGGAGGGATCTAAATCTCATGTCTCAACCAGAGTCATGGGTACTTATGGATATGCAGCCCCTGAATACATCTCTACGGGTCACTTAACCACAAAAAGCGATGTCTATAGCTTTGGTGTAGTCCTGCTAGAACTACTCACAGGAAGGAGAGCAATGGAGAAGACAAGGCCAAAGACAGAGCAGAGCCTTGTGGATTGGTCAAGACCTTATTTGAGCAGTTCAAGGAAGTTGAGGTATATCATGGATCCAAGACTTGCAGGGCAATACTCTGTGAAGGGTTCAAAGGAGATGGCTCGTTTGGCACAGCAATGCATAAGTCTGAATCCTAAAGACAGGCCAAGGATGGCAACCACTGTTGAAACCCTTGAAAACTTGCAGCAGTACAAGGACATGGCTATTACCTGTGGACACTGGCCTGCTTCAGCAAAATCTAGAAAGGGTGCTTCTGATAATAAGATCAAAATTGATATCAGAGTTGGTGCAACAAACCCCAGGAAGCCCTCTCCTTTAGTTGCAAGCAAAAAAACTTGA 1272 0.4756 MKQPSKSRPWRPLTANCCSTKDQTKIGNFIRCKPTSRSDLSKDVAPMPSFRRLSFSDLSRSSSMRINEDLAQSFGSDLHDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDGNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWATRLKIAIGAAKGLSFLHGAENPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVSTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQSLVDWSRPYLSSSRKLRYIMDPRLAGQYSVKGSKEMARLAQQCISLNPKDRPRMATTVETLENLQQYKDMAITCGHWPASAKSRKGASDNKIKIDIRVGATNPRKPSPLVASKKT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr22g00019 423 FunFam Serine/threonine-protein kinase PBS1 176 383 - -
Accr22g00019 423 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr22g00019 423 Gene3D Phosphorylase Kinase; domain 1 56 175 - -
Accr22g00019 423 FunFam Serine/threonine-protein kinase BIK1 59 175 - -
Accr22g00019 423 CDD STKc_IRAK 99 372 - -
Accr22g00019 423 PANTHER OS01G0588500 PROTEIN-RELATED 59 373 - -
Accr22g00019 423 SUPERFAMILY Protein kinase-like (PK-like) 75 370 IPR011009 -
Accr22g00019 423 MobiDBLite consensus disorder prediction 388 423 - -
Accr22g00019 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Accr22g00019 423 Gene3D Transferase(Phosphotransferase) domain 1 176 384 - -
Accr22g00019 423 Pfam Protein tyrosine and serine/threonine kinase 99 369 IPR001245 GO:0004672|GO:0006468
Accr22g00019 423 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr22g00019 81 385 Glycoside Hydrolase AT3G07070 51.133 1.14e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr22g00019 PK_Tyr_Ser-Thr 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr22g00019 - - gmx:100814241 701.819