Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr20g00059 ATGGCTTCCATTAATCACCCATGCCCACCAGGAGCCTGTGACTATGAAGCTAGGCACAACTTTCGAGCTGGTGGAAGAAGGCTAGAGATTGAAACGGCGACGTTACGTGTGGAAGAAACAACAACAATGAAGCAGATGAAGAGTGATGTTATCGATGGAGGAGAAGAGAAGGGAATATGGCTGACGTGGAAGGATGTGTGGGTGACAGCTTCTAATACAACTGGGAAGAAGAAGAAGAAAGAGAATATTAATAATGCAAATGGAAGCAGAAGAAAAACAATACTTGGAGGTCTGACTGGTTATGCAAAACCAGGCGAGCTTTTGGCCATTATGGGTCCTTCTGGTTGTGGAAAGTCTACTCTTCTTGATACTTTAGCAGGGAGATTAGGTTCAAATACAAGACAAGCGGGGGAAATTCTTATTAATGGCCAAAAACAAGCACTTGCTTATGGCACATCGGCATATGTGGCACAAGATGACACTTTACTCACAACCCTAACAGTTGGAGAAGCAGTGTACTATTCAGCCCAGCTTCAACTACCAGACACAATGTCAAAGGAAGAGAAAAGGGAAAGAGCAGAGTTCACAATAAGAGAAATGGGTCTACAAGACGCCATTAACACCAGAATTGGAGGTTGGGGCATCAAGGGAATAAGTGGAGGCCAAAAGAGAAGAGTGAGTATCTGCATAGAGATCCTCACACGTCCGAGGCTTTTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTGATGAACCGAATCGCAAGCCTCGATCGAAAAGATGGGATTCAAAGGACCATTATTGCTTCCATTCATCAGCCTAGTACTGAAGTGTTTCAGCTCTTTGATAATCTTTGCCTTCTTTCTTCTGGTAGAACTGTTTTCTTTGGTCCTGCTTCTGCAGCTAGTGAGTTCTTTGCTTCAAATGGCTTTCCGTGTCCTGCCCTCCAGAATCCATCGGATCATTTCTTGAAAACTATAAACAAGGATTTTGACGATAATCAGGACATTGAACTGGGCTTAGCTGGCACTCAAAGGAAGCCTACAGAAGAAGCAATCGAAATTCTTGTCAAGTCATACAAGTCTTCTGATTTGAACCAACAAGTTCAAGCAGAATTAGCAGCATTATCTACACAGGGAAATGGAATGGTGGAGAACCAGAGAGGGCATGCAAGCTTCCATACTCAGTGCATTGTTCTTACAAAGAGATCATTCGTGAACATGCGTCGTGATGTAGGCTATTACTGGTTACGCCTTGTCATATACGTCGCTGTGGCTCTAGGTTTGGCCACTGTGTTCTATGATCTGGGCATGAGCGAGGAGTCTATTAAAGATAGAGCTGCACTTCTTGCGTTTGTTTCTTCCTTCATAACTTTCATGACCATTGGTGGATTCCCCTCCTTCGTTGAAGATATGAAGGTATTTCAAAGGGAAAGGCTAAATGGTCACTATGGAGTGACAGCTTATGTGATAGGAAACACCTTATCTTCAATCCCATACCTATTACTCGTCTCTCTCATTCCTGGAGCCATAGCCTATTACCTCCCAGGCCTTCAAAAAACTGCTGAACACTTCATCTTCTTCTGCATTGTCCTCTTTTCATGTCTGATGCTAGTTGAAAGCCTCATGATGATAGTGGCCAGCATTGTCCCTAACTTCCTCATGGGAATCATAACTGGTGCTGGTCTTCAAGGCATCATGATACTCGCCGGCGGCTTCTTTAGATTGCCCAATGACCTCCCCAGAATATTCTGGAAGTATCCTCTCCACTTCGTCGCCTTCCATAGATATGCCTACCAAGGTCTGTTCAAGAATGAGTATGAAGGACTCAGAATTGCTGGTAAAAGTGGGGAATATATTCTAAGAAACATATGGCAGGTTAACATGAGTTATTCTAAGTGGGTTGATCTTGCAATTCTTCTGGGGAGTATTGTTGTGTATAGAGTTGTGTTCTTGGCAATCATCAAAGGAACTGAGAAGATGAAGCCTTTGGTTTCTTCTTTGTTTTCTGGGCCTCCTAAGAGAAGCAATCATATCATGGTCAATCCATATGCTACTCCTTTACAAGAAGGGGCTACATAA 2100 0.4343 MASINHPCPPGACDYEARHNFRAGGRRLEIETATLRVEETTTMKQMKSDVIDGGEEKGIWLTWKDVWVTASNTTGKKKKKENINNANGSRRKTILGGLTGYAKPGELLAIMGPSGCGKSTLLDTLAGRLGSNTRQAGEILINGQKQALAYGTSAYVAQDDTLLTTLTVGEAVYYSAQLQLPDTMSKEEKRERAEFTIREMGLQDAINTRIGGWGIKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMNRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVFFGPASAASEFFASNGFPCPALQNPSDHFLKTINKDFDDNQDIELGLAGTQRKPTEEAIEILVKSYKSSDLNQQVQAELAALSTQGNGMVENQRGHASFHTQCIVLTKRSFVNMRRDVGYYWLRLVIYVAVALGLATVFYDLGMSEESIKDRAALLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNTLSSIPYLLLVSLIPGAIAYYLPGLQKTAEHFIFFCIVLFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMILAGGFFRLPNDLPRIFWKYPLHFVAFHRYAYQGLFKNEYEGLRIAGKSGEYILRNIWQVNMSYSKWVDLAILLGSIVVYRVVFLAIIKGTEKMKPLVSSLFSGPPKRSNHIMVNPYATPLQEGAT 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr20g00059 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 310 IPR027417 -
Accr20g00059 699 Gene3D - 79 343 IPR027417 -
Accr20g00059 699 Pfam ABC-2 type transporter 278 338 IPR043926 GO:0140359
Accr20g00059 699 SMART AAA_5 104 298 IPR003593 GO:0016887
Accr20g00059 699 ProSitePatterns ABC transporters family signature. 218 232 IPR017871 GO:0005524|GO:0016887
Accr20g00059 699 Pfam ABC transporter 100 246 IPR003439 GO:0005524
Accr20g00059 699 FunFam ABC transporter G family member 11 59 365 - -
Accr20g00059 699 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 321 IPR003439 GO:0005524
Accr20g00059 699 Pfam ABC-2 type transporter 401 613 IPR013525 GO:0016020|GO:0140359
Accr20g00059 699 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 48 674 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr20g00059 105 282 Calmodulin-binding Proteins AT2G36910 31.892 2.09e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr20g00059 K05681 - gmx:100813462 958.362