Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr20g00058 ATGTCTTCCATTCATCATCCATGTCCACCAAGAGCCTGTGACTATGAAGCTAGGAAAAACTTTCGAGCTGGTGGAAGAGGGCTAGAGATTGAAACGGCGACGCTGCGTGTGGAAGAAACAACAAGAAGGAAGAAGATGAAGAAGAGTGATGATATCGATGGAGGAGAAGAGAAGGGAATATGGCTGACGTGGAAGGATGTGTGGGTGACAGCTTCTAATACAACTGGGAGGAAGAAGAAGAAAGAGAATATTAATAATGCAAATGGAAGCAGAAGAAAAACAATACTTGGAGGTCTGAGTGGTTATGCAAAACCAGGCCAGCTTTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCTACTCTTCTTGATACTTTAGCAGGGAGATTACGTTCAAACACAAGACAAGCAGGGGAAATTCTTATTAATGGCCACAAAAAAGCACTTGCTTATGGGACATCGGCATATGTGACACAAGATGTCACTTTACTCACAACCCTAACAGTTGGAGAAGCAGTGTACTATTCAGCCCAGCTTCAACTACCAGACACAATGTCAAAGGAACAGAAAAGGGAAAGAGCAGAGTTCACAATGAGAGAAATGGGTCTACAAGACGCCATTAACACCAGAATTGGAGGTTGGGGCTTCAAGGGAATAAGTGGAGGCCAAAAAAGAAGGGTGAGCATCTGCATAGAGATCTTGACACGTCCGAGGCTTTTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTGATGAGCCGAATCGCAAGCCTCGATCGAAAAGATGGGATTCAAAGGACCATTATTGCTTCCATTCATCAACCTAGTACTGAAGTGTTCCAGCTCTTTGATAATCTTTGCCTTCTTTCTTCTGGAAGAACTGTTTTCTTTGGTCCTGCTTCAGCAGCAAGTGAGTTCTTTGCTTCAAATGGCTTTCCTTGTCCTGCTCTCCAGAATCCATCGGATCATTTTTTGAAAACTATAAACAAGGATTTTGATGATAATCAGGACATTGAACTTGGTTTAGCTGGCACTCAAAGGAAACCTACAGAAGAAGCAATCGAAATTCTTGTCAAGTCATACAAGTCTTCTGATTTGAACCGACAAGTTCAAGCAGAAGTAGCAGCATTATGTACACAGGGAAATGGAATGGTGGAGAAGAAGAAGAAGAGAGGGCATGCAAGCTTCCATACTCAGTGCATTGTTCTTACGAAGAGATCATTCGTGAACATGCGTCGTGATGTAGGCTATTATTGGTTACGCCTTGTCATATACGTCGGTGTGGCTCTAGGTTTGGCCACTGTGTTCTATGATCTAGGCATGAGCGAGGGGTCTATTAAAGATAGAGCTGCACTTCTTGCGTTTGTTTCTTCCTTCATAACTTTCATGACCATTGGTGGATTCCCCTCCTTCGTTGAAGATATGAAGGTATTTCAAAGGGAAAGGCTAAATGGTCACTACGGAGTGACAGCTTATGTGATAGGAAACACCTTATCTTCAATCCCATACCTATTACTCGTCTCTCTCATTCCTGGAGCCATAGCCTATTACCTCCCAGGCCTTCAAAAAACCGTTGAACACTTCATCTTCTTCTGCAGTGTCCTTTTTTCATGTTTGATGCTAGTTGAAAGCCTCATGATGATAGTGGCCAGCATTGTCCCAAACTTCCTCATGGGAATCATAACTGGTGCTGGTCTTCAAGGCATCATGATACTGGCCGGCGGCTTCTTTAGATTGCCCAATGACCTCCCCAGAATATTCTGGAAGTATCCTCTCCACTTCGTCGCCTTCCATAGATATGCCTACCAAGGTCTGTTCAAGAATGAGTATGAAGGACTCAGGATTGCTGGTAAAAGTGGGGAATATATTCTAAGAAGCATATGGCAAGTTAACATGAGTTATTCTAAGTGGGTTGATCTTGCAATTCTTTTGGGGATTATTGTTGTGTATAGAGTTATGTTCTTTTCAATCATCAAAGCAATTGAGAAGTTGTGTTCTTAA 2019 0.4294 MSSIHHPCPPRACDYEARKNFRAGGRGLEIETATLRVEETTRRKKMKKSDDIDGGEEKGIWLTWKDVWVTASNTTGRKKKKENINNANGSRRKTILGGLSGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLRSNTRQAGEILINGHKKALAYGTSAYVTQDVTLLTTLTVGEAVYYSAQLQLPDTMSKEQKRERAEFTMREMGLQDAINTRIGGWGFKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVFFGPASAASEFFASNGFPCPALQNPSDHFLKTINKDFDDNQDIELGLAGTQRKPTEEAIEILVKSYKSSDLNRQVQAEVAALCTQGNGMVEKKKKRGHASFHTQCIVLTKRSFVNMRRDVGYYWLRLVIYVGVALGLATVFYDLGMSEGSIKDRAALLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNTLSSIPYLLLVSLIPGAIAYYLPGLQKTVEHFIFFCSVLFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMILAGGFFRLPNDLPRIFWKYPLHFVAFHRYAYQGLFKNEYEGLRIAGKSGEYILRSIWQVNMSYSKWVDLAILLGIIVVYRVMFFSIIKAIEKLCS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr20g00058 672 Gene3D - 80 344 IPR027417 -
Accr20g00058 672 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 322 IPR003439 GO:0005524
Accr20g00058 672 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 50 669 - -
Accr20g00058 672 SMART AAA_5 105 299 IPR003593 GO:0016887
Accr20g00058 672 FunFam ABC transporter G family member 11 60 366 - -
Accr20g00058 672 Pfam ABC-2 type transporter 279 341 IPR043926 GO:0140359
Accr20g00058 672 Pfam ABC-2 type transporter 404 616 IPR013525 GO:0016020|GO:0140359
Accr20g00058 672 ProSitePatterns ABC transporters family signature. 219 233 IPR017871 GO:0005524|GO:0016887
Accr20g00058 672 Pfam ABC transporter 99 247 IPR003439 GO:0005524
Accr20g00058 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 311 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr20g00058 106 283 Calmodulin-binding Proteins AT2G36910 31.351 2.20e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr20g00058 K05681 - gmx:100813462 909.057