Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr20g00057 ATGTCTAACCCAACAACAATAGCCATGTCCTTCCTTTTATTCTTTCAATTCCTTTTCACTTCTTGTGTCAGCTCCTACATTCCTGATGAGCATTTCGCAGTCAACTGCGGTGGCTCCGGCAATTCTCCTTCAGTTGATGGCCGGAAGTGGACCGGAGAAGACATAGACTCCGAACGTTTCTCTCTGATCGAAGACAGCAACAATAACCCATCAGTAAGTGCCACCGCACCCGTCAAAATCATCCCTTACAGCACCTCACGCCTCTCCCGCTCTGAATTCTCCTACCGGTTTTATGTGAAAACCGCCGGCCAAAAGTTCATTCGCCTTTATTTTTACCCATCTTTCTACAACCCCAACTTCCTTCGCTCTGATGCTATCTTCTCTGTCAAAGCAGGGCTCCACACCCTTCTGAAGAACTTCAATGCTTCACTTAACGCCGACGCTGGCGTTTCACTTAACGGTTTTGCTCTAGAAGGAGCCATCGTACGAGAGTACTGCGTCAACATTGGTGACCCTGGTGAGGGGCTTAGCATAACCTTCACACCCAGCACATCTCATCAAAGTGCTTATGCCTTCATCAATGGGATCGAAGTCCTCTCTATGCCCTCCTTTCTTTATTACACAAACCCCGAAAACCTGCAGGGGATGATGCTAAATGGTGGAACCCAACAGTATGGGGTCAAAAGTTACAATGCTCTCGAGACTATGTACAGAACTAATGTTGGCGGAAGTCAGATCGCTCCCGAAAAAGACACAGGCATGTTTCGTTATTGGGACCAGGATAATGCCTACTTAGAGAGCGGGGAGCGCCCAGACAGTAAACCAGATGGTATTGGTTTATTTAGGCTAGACTACGAAGATTATCCAAATTATACTGCACCGGACGACGTATACCTGACTGCTCGAAGCTATGGAGCGAAAGAAACTTCCAAATATAACGTGACTTGGGAGTTTCAAGTTGACTCACAGTTTGTTTATATGGTGAGATTGCATTTTTGTGAGTTTGACCCACACATTCAAAAAGCTGGAGACAGAGTTTTTCAGGTCTTCATAAATGATGATTTGGTGGAGTCTGTCGCCGATGTGATGATGTGGACTGACAGTCATACACTGGTTCCTGTCCATAGGGACTATGCTGTGAGGATGCAGAGCAATGGAAGCTTAAAGAAGCCAAATCTTTCAATTAAGTTGCAACCAGTCCCACCTGCAAGAACCACTTACAGCGATGTGTTATTGAATGGTATTGAAACTCTTAAAATAAGTGACTTCAACAACGATCTCGGAGGTTCCAATCCTGATCCACTTGCTTCTCCTTCATTACTGCCTCCGAAGGTATCCAAGAAGAACTCACCAAAAATGAGAGTAATTTCCATAGTTGTGGGGTCAGCTTGCGGGTTCATTCTACTATCTCTCCTCATTTTGTTGAGTTGTTGTTGGTTGACTAGAACTGCAATCAACGAAGGAAATTCACAGTGCGTACCACAATCAATATCGTCGTCAAACACAAACAAATCCTCACTGTTACCATCCGATTTGTGTCGGAGCTTTACAATAGGCGAGGTAAGAGTTGCCACCAATAATTTTGATGATAGTTTAATCATAGGTGTTGGGGGGTTTGGAAATGTCTACAAAGGTCAAATTGACGACAGTTCAGTTCCTGTAGCAATCAAACGACTCAAACAAGGTTCACAACAAGGGCTCAAAGAGTTCCAAACTGAGGTTGAAATGCTCTCTCAACTTCGTCATCATCATTTGGTATCTCTTGTTGGTTACTGCAACGACGACAAGGAGATGATCCTTGTCTACGAGTTCATGGCTCATGGGACCTTTCGTGAGCATCTTTACGACACTGAAAAACAACTACTTTCTTGGAATCAACGGCTGGAAATTTGTCTAGGTGCTGCGCGGGGACTGCATTACCTACATACAGGGGCAAAGCATGGAATCATTCACCGGGACGTCAAGTCAACAAACATCTTAATTGATGAAAACTGGATGGCAAAGATTTCAGATTTCGGACTATCCAAAATAGGACCCGCAGGTATTTATAGATCTAACATTAACATAAGCACAGTAGTGAAAGGAAGCATTGGATATTTGGATCCTGAATACTACACTTTACAAATATTGACGGACAAGTCTGATGTGTACTCATTTGGAGTTGTGTTGCTAGAGGCATTATGTGGGAGGCCTCCTATTCTCCGTGCAGTAGAGAGGGAACGACAAAACCTTGTAGAGTGGTTTCGAAAAAGTGTTGATGAGAATGAGATTTATGAGATAGTGGATCCAATGTTGAGGGAAAGTATAACTCCAGAGTGCTTAAAGGCTTACAATAAGATTGCATTGAAATGTTTGGCGAATAATTGGAATGATCGGCCATCCATGGGTGATGTGATGTTGGGCCTTGAGTCTTTGGTGGAGATGCTTAACCAAGCTGAGAAGACAAACCGTTGTGGGACTCTAAATGAGGAGATTACAGTTGAAGAAGTTTCAGTATTCAATGGAGTCTTCTTCAACTTTGTCATGGTGAAGGTGACGGCGGACGGTGTAGTCGACGATGGACAACGAGTTGATCCAGATTTTTCAGTCGCCGGGAAGGGAGCTTCAACGGACGGAGTTGATCTAGATTTTTCAGCCACGGGGAAGAGACCTTCGATGGAGAGATTGAACCAAATTTTTCAGCCGTGA 2688 0.442 MSNPTTIAMSFLLFFQFLFTSCVSSYIPDEHFAVNCGGSGNSPSVDGRKWTGEDIDSERFSLIEDSNNNPSVSATAPVKIIPYSTSRLSRSEFSYRFYVKTAGQKFIRLYFYPSFYNPNFLRSDAIFSVKAGLHTLLKNFNASLNADAGVSLNGFALEGAIVREYCVNIGDPGEGLSITFTPSTSHQSAYAFINGIEVLSMPSFLYYTNPENLQGMMLNGGTQQYGVKSYNALETMYRTNVGGSQIAPEKDTGMFRYWDQDNAYLESGERPDSKPDGIGLFRLDYEDYPNYTAPDDVYLTARSYGAKETSKYNVTWEFQVDSQFVYMVRLHFCEFDPHIQKAGDRVFQVFINDDLVESVADVMMWTDSHTLVPVHRDYAVRMQSNGSLKKPNLSIKLQPVPPARTTYSDVLLNGIETLKISDFNNDLGGSNPDPLASPSLLPPKVSKKNSPKMRVISIVVGSACGFILLSLLILLSCCWLTRTAINEGNSQCVPQSISSSNTNKSSLLPSDLCRSFTIGEVRVATNNFDDSLIIGVGGFGNVYKGQIDDSSVPVAIKRLKQGSQQGLKEFQTEVEMLSQLRHHHLVSLVGYCNDDKEMILVYEFMAHGTFREHLYDTEKQLLSWNQRLEICLGAARGLHYLHTGAKHGIIHRDVKSTNILIDENWMAKISDFGLSKIGPAGIYRSNINISTVVKGSIGYLDPEYYTLQILTDKSDVYSFGVVLLEALCGRPPILRAVERERQNLVEWFRKSVDENEIYEIVDPMLRESITPECLKAYNKIALKCLANNWNDRPSMGDVMLGLESLVEMLNQAEKTNRCGTLNEEITVEEVSVFNGVFFNFVMVKVTADGVVDDGQRVDPDFSVAGKGASTDGVDLDFSATGKRPSMERLNQIFQP 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr20g00057 895 ProSitePatterns Protein kinases ATP-binding region signature. 534 557 IPR017441 GO:0005524
Accr20g00057 895 SUPERFAMILY Protein kinase-like (PK-like) 502 800 IPR011009 -
Accr20g00057 895 FunFam Receptor-like protein kinase FERONIA 500 604 - -
Accr20g00057 895 SMART serkin_6 528 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr20g00057 895 Pfam Malectin-like domain 34 419 IPR024788 -
Accr20g00057 895 FunFam FERONIA receptor-like kinase 231 421 - -
Accr20g00057 895 Gene3D - 231 419 - -
Accr20g00057 895 Gene3D - 31 201 - -
Accr20g00057 895 FunFam Receptor-like protein kinase FERONIA 605 824 - -
Accr20g00057 895 CDD STKc_IRAK 534 811 - -
Accr20g00057 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Accr20g00057 895 Pfam Protein tyrosine and serine/threonine kinase 534 799 IPR001245 GO:0004672|GO:0006468
Accr20g00057 895 PANTHER OS03G0124300 PROTEIN-RELATED 10 483 IPR046957 GO:0004672
Accr20g00057 895 FunFam FERONIA receptor-like kinase 31 202 - -
Accr20g00057 895 ProSiteProfiles Protein kinase domain profile. 528 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr20g00057 895 Gene3D Transferase(Phosphotransferase) domain 1 605 827 - -
Accr20g00057 895 Gene3D Phosphorylase Kinase; domain 1 513 604 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr20g00057 23 829 Receptor kinase-like Gene Family AT3G51550 43.179 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Accr20g00057 Malectin_like 5.9e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr20g00057 - - pcin:129293555 933.71