Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr20g00052 ATGACACCAAATCTTCAGCTTCACTTATTAGCCAGCTGGGTTTTCACAAATCTTCTGCTTCTTCTGTTTCTGTTTAGAAACGCAGATTGTGGTCACATAGTCAAGTCTCTTCCTGGCTTTCCTGGTGAACTCCCTTTCAAACTAGAATCTGGATATATCGGGGTGGAGCAGTCTGAATTGTATTACCTGTTTGTGGAATCTACTGGGTATCCAAAAACTGATCCTCTTTTGCTATACTTAGTGGGAGGTCCTGGTTATTCTGGTTTTAATGGATTCTTCTACCAAACTGGTCCACTGGCTTTCAATGACTCATACTACAATGGAGGTTTGCCAGAGTTATACTTGAGACCTTATCCGTGGACAAAGACTGCCAGCATTATATTTCTAGATGCACCTGTGGGCACTGGATTCTCATATGCCAAGGATCCACAAGATTTGGTTGTATCAGACACATCATCTGCAAGACAAACTTACAAGTTCTTAAGAAAGTGGCTGGTAGAACACCCTGAGTACATGAACAACCGGCTGTTCATAGCAAGTGATTCATATAGTGGCATAGCTGTGCCACTCATTGTTCAGCATATATTAGATGATAATGATGCTGGAATGTTGCCACACTTGAAGTTAATAGGATTCATAAGTGGGTCTCCACATCAAGGTAATGAGTTAGAAGAAAATGCAAAAGTAGAGGTAGCTTACAGATTGGGACTTATAGCAAACAAACTATACCAGAGAGCCAAAGAGAGCTGCAATGGACAGTATTATATAGTAGACCCATCGAATACGGAATGTGAAGAAGCACTTGGAAAAATTGATGAGCTGCTGAATGATATATTTACTGAGAATGTTTTGGGCCCACAGTGTGCGACTGTTTCACCAAAACCAGATGAAGATGAGAGTCACTCTGCAAGAAGAAGTCTGCAAGTAGAGAAATCAAGACATTTCTCTGGCCTATCTGATCCACAATGGTATTGCAAGAATTCTGCTTATGTACTTTCATATGCATGGGCAAATAATGAGACTGTCAAAGAAGCACTTCACATCAGAGAGGGAACCGTAGAGAAGTGGTACAGATGCAATCTTGTCCAGCAGGATCTGTACAATCATAATCTTGAATCTGTCTTCAGCTACCAAAAGAATTTTACTGAAACAGATTTACAAGTCTTGCTTTATTCGGGTGATCATGACCTTGTTGTCCCACATTTAGCCACAGAAAATTGGATAAAGGACCTTAATATCACTGAAGAGTATTCTTGGCGTCCTTGGTTTGTGGATGGTCAGGTTGCAGGGTACAAAATTATATATCGGAATTATGCATATAGCTTGACATATTTAACTTTTAAGGGTTCAGGGCATTCTCCCACAGAGTACTACAATCAAAGAGCCTATGAAATGTTTGCAAGGTGGATCCATTTTTATCCTGTCTAA 1428 0.4027 MTPNLQLHLLASWVFTNLLLLLFLFRNADCGHIVKSLPGFPGELPFKLESGYIGVEQSELYYLFVESTGYPKTDPLLLYLVGGPGYSGFNGFFYQTGPLAFNDSYYNGGLPELYLRPYPWTKTASIIFLDAPVGTGFSYAKDPQDLVVSDTSSARQTYKFLRKWLVEHPEYMNNRLFIASDSYSGIAVPLIVQHILDDNDAGMLPHLKLIGFISGSPHQGNELEENAKVEVAYRLGLIANKLYQRAKESCNGQYYIVDPSNTECEEALGKIDELLNDIFTENVLGPQCATVSPKPDEDESHSARRSLQVEKSRHFSGLSDPQWYCKNSAYVLSYAWANNETVKEALHIREGTVEKWYRCNLVQQDLYNHNLESVFSYQKNFTETDLQVLLYSGDHDLVVPHLATENWIKDLNITEEYSWRPWFVDGQVAGYKIIYRNYAYSLTYLTFKGSGHSPTEYYNQRAYEMFARWIHFYPV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr20g00052 475 Gene3D - 324 473 - -
Accr20g00052 475 Gene3D alpha/beta hydrolase 28 295 IPR029058 -
Accr20g00052 475 FunFam Serine carboxypeptidase-like 19 27 294 - -
Accr20g00052 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Accr20g00052 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Accr20g00052 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Accr20g00052 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Accr20g00052 475 FunFam Carboxypeptidase 323 475 - -
Accr20g00052 475 SUPERFAMILY alpha/beta-Hydrolases 34 471 IPR029058 -
Accr20g00052 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 455 IPR001563 GO:0004185|GO:0006508
Accr20g00052 475 Pfam Serine carboxypeptidase 38 471 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr20g00052 27 57 Calmodulin-binding Proteins AT2G22960 61.290 9.67e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr20g00052 K16296 - pvy:116118980 529.635