Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr20g00033 ATGGACAATAGTGGTAGCAGAGCCGAAGCTGAACGGTGGCTCTACACAGCCAATAAGCTCCTCAGCGCACGTGATCTGCACGGGGCTAGGTCTTTTGCTGTTCGAGCTCGTGAATCCGATCCTACATTTGACGCCTCCGAGTTGCTCCTCGCCGTCATCGATACACTCCTCTCCGGTGAGACTCAGATCAATGGCCTCCATGACTGGTATAGCATCCTCCAGATTCTTCCTTACACTCACAACATCGAGTACATCGCTTCTCAGTACCGTCGTCTCGCTCTTCTCCTCGACCCGCACCGTAACCCTTTTGCTTTTTCAAGCCATGCGTTCACGCTCGTGCATGACGCGTGGTCTGTACTCTCCAATCCTGCTAAGAAGGCTATGTACGACAACGAGCTGCGATTGGTCACTGCTCCTCCTCCTGCTGCCCCTTCCTCGCAGCCTGTTTCGGTGGCGTCAGCGGTTCACGTGCCGAACCCGGTCCCGCCTCCGAACCCAACTCCGACGCCGAATCCAGCCCCAGTCCAGCGGCAACAGCAGAAAAGTCCGGCGAAGAGAGGCCCAAAGCCGAAAGATAGGGCGGGAACCGGGGAGCAACGGCCGAACCCTAACATTGCAGCAACGGAGCCGACCACGCAAGCTCGGACGAGCGACCTGGTGGAGTCTGAAACGGGTTCGAGTTTCTGGACGGCGTGCCCGTACTGTTACGTGATGTATGAGTACCCGACGTTGTACGAGGACTGTACTCTAAGGTGCCAGAGCTGTAGGAGGGGATTTCATGCGATGAAGGTACGGACGCCGCCGATGGCTGGGAAAGATTCGTATTATTGCTGTTGGGGGTTTTTCCCGTTAGGGTTTTCAGGGGATTTCAAAGATATAAGTGGGACTAATTCCAAGTGGAACCCATTTTCTGCAATGTTTGCATGCCCTTTGAAAGGAGGGGGAGGAGTAAAATCTGCGAGAGGACCTTGGGTTTATCATGATGATGATGCTGCTGCTGCATTCATTGAACTTTCTGATCCAAGCGACGATGATTCAGATGATGCTGATTGGGGAGCGAGGGTTGAGAGGGCGAAGAAGAGGGCTAGGAACAAAGGGAAAAATTCTGGTAATGCTAGTGGTGGTGATGGTAGAAGGGCATTTTCTGAGAGAACTAGGAGAGGGAGCCAGAGTGGGACAGGACATGCCAATTTAGAAAATGGTGTGGTTGGGGAAGGTGGTGGATCTGGTGTGCCTAACACCGCGAGGGCGGAATTGAGTAAAAAAGCTGTGAATAGTTCAAGAAGAAGGGGTGCAGGGAACCTGGGGAAATTGGATTTGAATGTGGAGTTTAGTAATGAGGTGGAAGAGCCGGCTCCGGCGGTGAGAGATGGTAATGTGGCTGGAAATCCTGAGGAGAATATAGAAGGCAATGCATTTTTTGAGGGTCTTGATGAATTCCTTAACAGCTTGCCCATTCTCAATGCCGTGGCAGACGACAAGGTTAAGGGTCACTAG 1497 0.5271 MDNSGSRAEAERWLYTANKLLSARDLHGARSFAVRARESDPTFDASELLLAVIDTLLSGETQINGLHDWYSILQILPYTHNIEYIASQYRRLALLLDPHRNPFAFSSHAFTLVHDAWSVLSNPAKKAMYDNELRLVTAPPPAAPSSQPVSVASAVHVPNPVPPPNPTPTPNPAPVQRQQQKSPAKRGPKPKDRAGTGEQRPNPNIAATEPTTQARTSDLVESETGSSFWTACPYCYVMYEYPTLYEDCTLRCQSCRRGFHAMKVRTPPMAGKDSYYCCWGFFPLGFSGDFKDISGTNSKWNPFSAMFACPLKGGGGVKSARGPWVYHDDDAAAAFIELSDPSDDDSDDADWGARVERAKKRARNKGKNSGNASGGDGRRAFSERTRRGSQSGTGHANLENGVVGEGGGSGVPNTARAELSKKAVNSSRRRGAGNLGKLDLNVEFSNEVEEPAPAVRDGNVAGNPEENIEGNAFFEGLDEFLNSLPILNAVADDKVKGH 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr20g00033 498 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Accr20g00033 498 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 371 - -
Accr20g00033 498 MobiDBLite consensus disorder prediction 359 434 - -
Accr20g00033 498 MobiDBLite consensus disorder prediction 201 220 - -
Accr20g00033 498 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Accr20g00033 498 SMART dnaj_3 67 125 IPR001623 -
Accr20g00033 498 MobiDBLite consensus disorder prediction 157 173 - -
Accr20g00033 498 Pfam DnaJ domain 68 130 IPR001623 -
Accr20g00033 498 CDD PHD_SF 232 277 - -
Accr20g00033 498 Gene3D DnaJ domain 65 138 IPR036869 -
Accr20g00033 498 CDD DnaJ 68 122 IPR001623 -
Accr20g00033 498 MobiDBLite consensus disorder prediction 140 220 - -
Accr20g00033 498 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr20g00033 9 497 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 37.302 3.67e-99 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr20g00033 - - pcin:129296576 792.341