Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr20g00010 205 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Accr20g00010 205 Coils Coil 123 176 - -
Accr20g00010 205 CDD MADS_MEF2_like 3 74 IPR033896 GO:0000977|GO:0045944
Accr20g00010 205 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Accr20g00010 205 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Accr20g00010 205 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Accr20g00010 205 Pfam K-box region 88 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr20g00010 205 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 177 - -
Accr20g00010 205 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Accr20g00010 205 Gene3D - 13 85 IPR036879 GO:0003677|GO:0046983
Accr20g00010 205 ProSiteProfiles K-box domain profile. 86 179 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr20g00010 205 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Accr20g00010 205 SUPERFAMILY SRF-like 2 87 IPR036879 GO:0003677|GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr20g00010 1 179 MADS-box Gene Family AT2G22540 49.451 1.44e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Accr20g00010 K-box 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr20g00010 - - pcin:129285682 265.003