Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03617 ATGGGCGTCACCAAAGGGTACTGTTATAAGATGAGATTCGTGTATGCCCATTTCCCAATCAACGCATCCATAACTAAGAACAGTCGTTCCATTGAGATCCGTAATTTCCTTGGGGAAAAGAAGGTGAGGAAAGTGGAAATGCTTGAGGGGTCTCTATCATTCGATCTGAAAAGGTCAAGGATGAGCTTATATTGGATGGGAATGATGTGGAGTTGGTCTCTCGCTCTGCAACTCTCATTAATTAGAAGTGCCATGTAA 258 0.4302 MGVTKGYCYKMRFVYAHFPINASITKNSRSIEIRNFLGEKKVRKVEMLEGSLSFDLKRSRMSLYWMGMMWSWSLALQLSLIRSAM 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03617 85 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 2 51 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Accr1g03617 85 Gene3D - 7 68 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Accr1g03617 85 SUPERFAMILY Ribosomal protein L6 7 50 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03617 Accr-Chr1 72841398 72842590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03617 2 50 Cytoplasmic Ribosomal Protein Gene Family AT4G10450 81.633 9.09e-26 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03617 K02940 - ming:122073162 95.5153