Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03613 ATGGGCCATAGTTCGAGGAAGAAGAAGCGTGGAGGAGGTAGTGGAAGGAGAATTAAGGGAAGAACACCCTTAAAAGATCATGCATCTCAAGTTAGTGGGGTTGATAATGAACTATCGGAAGAAATCACCGCTTTATGTGCAATTTTCCAAGAAGACTGCAAGATTCTTCCTGGATCACCTCCTCAGATAGTTATTAAGCTCAGACCCTATTCAAAGGACATGGGATATGAGGATGTAGATGTTTCTGCTGTTCTCGTTGTTAGGTGCTTACCTGGCTATCCTTTAAAGTGTCCAAAGTTGCAAATTACTCCTGAGAATGGTTTATCAGAGAGTGATGCTGATAAACTTCTGTCTCTCCTCCATGATCAGGCTATCCTAAATGCCAGGGAGGGAAGAGTAATGATCTTTAATTTGGTGGAGGCTGCTCAAGAGTTTATGTCTGGTATTGAGCCAGCTGGCAAATCAAATGACTGTAAGAATTTGCGTTCAACTGTGGAAAGCAATGAAGAATTGTTTCTTAAGGATATAGCAACTTCAAATAGAAGTTCTTTTGCTTATGGTTTCATAGACCTCTTTAGTGGCTATGGAGAATCATGGAATTGGGGTTTTGGAATGGATGACACTAGTGGTAACATTTCTCCTGTCCCACCCTCGAAGTTAGATGCTGCAGAACATGCTTATGGGACTGAGGAAAATAAATCTGATAGAACTTCAGAATCACCTAAAATGCAAGAAACAAAGCAAGGCCCATTAGTTTCTCCAACTGCCAAATTAGATAACTTGGGGGAAAACGGTGAAGAAAGCAACAAGAGCATGCATTCATCTAATTCAAGTAGTTCTGATGCAGTGGAGCCCATAGGGAATGGCAATGAAAATGAGAAAGAGCATGATTTTCTCCTGGATGAGTCTACATCAGAGGTTAATGAAGAAGGTATTTATGCACCTGCATCTTCAGAGTCCCAGTCTTCTGCCGCTCATCATCAAGAACCTCAAACAGATGAAAGGGATCTGATAATGGTTCACTTGCTTCGCCTTGTATGTTCCTCAAAAAGTCCTTTGGCTAACTCTTTGCCGCAAATAGCCACAGAGCTGCACCATTTAGGGGTCATTTCTGATTGGGCAAGGGATATGGCATCTGAACCACCTTCTTCTTTTAACAAAACCTTTGATCATGTCTTCCAGAAACACCTGGTATCATCTAAAATATCACAGTTTTGGAAACCTTCTGATCTTGGAGGCCCAACTATGGTCCCCACAAGTTCTCGATATCTGAATGACTTTGAGGAGCTACGGCCTCTTGGTCATGGTGGTTTTGGTCATGTTGTGTTGTGCAGAAACAAACTTGACGGTAGGCAGTATGCAGTAAAGAAAATTCGCCTTAATGACAAAAGCATGCCTATAAATGATAGGATTTTAAGGGAGGTGGCAACTCTTTCCCGTCTGCAACATCAGCATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGTATTGCTGATTCTTACGCTGATGCTACATGGGGTTCAAGGACTCCATTCAGCTCCACCTTCAGCTTTAAAGCTGCAAGGTCCCATGAGGCTCTTGGACATGAGAATCAGCTCGAATCAACTTTCCTTTACATTCAAATGGAGTACTGCCCCGGGACCCTCCGACAGGTATTTGAGTCTTACACTCATTTTGACAAAGAGAGTGCATGGCATTTGTTCCGTCAAATACTAGAAGGCTTGGCACACATACATGGACAGGGAATAATTCATCGGGATTTGACTCCAAGTAACATATTTTTTGATGCTCGCAGTGATATCAAAATTGGTGATTTTGGTCTTGCCAAGTTTTTGAAGTTGGAGCAGTTGGATCAAGATCTTGGATATCCAGCTGATATAAAGGGAATTTCCGTTGATGGCACGGGACAAGTTGGCACCTATTTCTATACAGCTCCTGAAATTGAACAAGGATGGCCTAAGATTGATGAAAAGGCTGATATGTACAGCTTGGGGGTAGTTTTCTTTGAACTTTGGCACCCGTTTGCAACAGCAATGGAGAGACATATTGTATTATCTGATCTGAAGCAGAAAGGAGAACTACCTTCTCCATGGATTGCCGAGTTCCCAGAACAGGAAGCCTTGGTTCGGCACCTAATGTCTCCAAGTCCAAGTGATCGCCCGTCTGCCACAGAACTTTTACAGCATGTATTTCCTCCTCGAATGGAGTCTGAGTTGTTAGATGATATTTTACAAACAATGCAGACATCTGAGGATAGAAGGATATATGATAAAATTGTGAATGCTATCTTTGATAAAGAGATACTAAGAGCAAAAGAAAACCTCCATGGGGCTGGTAGATTGGTGCCAGTTGGTGATAATAATTCGTCCATTCAATACACAGAAATAGCAACTGAGGTCCGTGATTATGTTGTAGATGTCACGAGGGAAGTATTCAGGCAGCATTGTGCAAAGCGCCTGGAAATATTAACAATGCGATTATTGGATGATTTTCCAGAGTATAATAGAAATGCAGTCAAACTTTTGACCAATGGAGGAGACATGCTTGATCTTTGTTATGAGCTGCGTTTGCCTTTTGTAAACTGGATTGTATCTAACCAGAAATCTTCTTTCAAACGATATGAGATATCATGTGTCTACAGAAGAGCAGTTGGACGTTCATCACCAAACCGGTACCTTCAGGGTGATTTTGACATAATTGGTGGTGCATCAGCATTGACAGAGGCAGAGGTCATAAAGGTGACTAGGGATATAGTCACTTATATTTTTCCTGCAGACGCTTGTGACATTCATCTAAATCATGGTGATCTACTGGATGCAATTTGGTCATGGATAGGTGTTAAGGATGAGCACAGACTTAAAGTGGCAGAGCTTCTTGCAATGATGGGTTCTCTGCGCCCACAATCCTCAGTAAGGAAATCAAAATGGGCAGTCATACGGAGGCAGCTTTTGCAGGAACTGAATTTAGCAGAAGCTATTGTAAATAGGTTACAAACAGTAGGTTTAAGATTCTGTGGAGCCGCAGATCAGGCCCTTCCTAGACTAAGAGGAGCCCTTCCTCCCGATAAACGTACACGCAAGGCACTTGAAGAATTGTCTGAGCTCTGCAATCTCTTGAGAGTTTGGAGGATTGACAACAATGTTTTTATAGATGCGTTAATGTCCCCAACGGAAATTTACCACAGAAGTTTCTTTTTCCAGGTATACATAACAAAGGAGAATAATCCTGGATCATTCCCAGAAGGTGCCTTGCTGGCTGTTGGTGGTTGCTATGACTATCTGCTTCATCAGATGTGGATTCGTCACTTCAAAGCAAATCCTCCCAGTGGTGTAGGAGCCAGCCTTGCGCTAGAGACAATAATTCAGAACTGTCCAGTAGATTTTAAGCCCATTAAAAATGAAGCCAGCACCAATATTCTTGTTTGTTCAAGAGGAGGTGGTGGTCTGCTAACAGAGCGTATGGAACTGGTGGCTGAATTATGGGAGAAAGACTTTAAGGCTGAATTTGTTCCCACCCCTGATCCAAGTCTCACAGAGCAGTATGAGTACGCCAATGAACATGATATCAAATGTCTTGTTATCATCACAGATCAGACCGATTCTCTAAAGGTTCGCCACCTTGAACTCAAGAAGGAGAAGAAAGTTGAGAGAGAAAATCTAGTCAAGTTCTTATCAAATGCTATGGCAACACAATTTAGAAACCCCTTCATTTGGAACTGA 3723 0.4217 MGHSSRKKKRGGGSGRRIKGRTPLKDHASQVSGVDNELSEEITALCAIFQEDCKILPGSPPQIVIKLRPYSKDMGYEDVDVSAVLVVRCLPGYPLKCPKLQITPENGLSESDADKLLSLLHDQAILNAREGRVMIFNLVEAAQEFMSGIEPAGKSNDCKNLRSTVESNEELFLKDIATSNRSSFAYGFIDLFSGYGESWNWGFGMDDTSGNISPVPPSKLDAAEHAYGTEENKSDRTSESPKMQETKQGPLVSPTAKLDNLGENGEESNKSMHSSNSSSSDAVEPIGNGNENEKEHDFLLDESTSEVNEEGIYAPASSESQSSAAHHQEPQTDERDLIMVHLLRLVCSSKSPLANSLPQIATELHHLGVISDWARDMASEPPSSFNKTFDHVFQKHLVSSKISQFWKPSDLGGPTMVPTSSRYLNDFEELRPLGHGGFGHVVLCRNKLDGRQYAVKKIRLNDKSMPINDRILREVATLSRLQHQHVVRYYQAWFETGIADSYADATWGSRTPFSSTFSFKAARSHEALGHENQLESTFLYIQMEYCPGTLRQVFESYTHFDKESAWHLFRQILEGLAHIHGQGIIHRDLTPSNIFFDARSDIKIGDFGLAKFLKLEQLDQDLGYPADIKGISVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFATAMERHIVLSDLKQKGELPSPWIAEFPEQEALVRHLMSPSPSDRPSATELLQHVFPPRMESELLDDILQTMQTSEDRRIYDKIVNAIFDKEILRAKENLHGAGRLVPVGDNNSSIQYTEIATEVRDYVVDVTREVFRQHCAKRLEILTMRLLDDFPEYNRNAVKLLTNGGDMLDLCYELRLPFVNWIVSNQKSSFKRYEISCVYRRAVGRSSPNRYLQGDFDIIGGASALTEAEVIKVTRDIVTYIFPADACDIHLNHGDLLDAIWSWIGVKDEHRLKVAELLAMMGSLRPQSSVRKSKWAVIRRQLLQELNLAEAIVNRLQTVGLRFCGAADQALPRLRGALPPDKRTRKALEELSELCNLLRVWRIDNNVFIDALMSPTEIYHRSFFFQVYITKENNPGSFPEGALLAVGGCYDYLLHQMWIRHFKANPPSGVGASLALETIIQNCPVDFKPIKNEASTNILVCSRGGGGLLTERMELVAELWEKDFKAEFVPTPDPSLTEQYEYANEHDIKCLVIITDQTDSLKVRHLELKKEKKVERENLVKFLSNAMATQFRNPFIWN 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03613 1240 SUPERFAMILY Class II aaRS and biotin synthetases 798 1123 IPR045864 -
Accr1g03613 1240 MobiDBLite consensus disorder prediction 288 303 - -
Accr1g03613 1240 MobiDBLite consensus disorder prediction 226 242 - -
Accr1g03613 1240 FunFam eIF-2-alpha kinase GCN2 28 156 - -
Accr1g03613 1240 FunFam eIF-2-alpha kinase GCN2 792 1128 - -
Accr1g03613 1240 Gene3D Phosphorylase Kinase; domain 1 415 545 - -
Accr1g03613 1240 FunFam Histidine--tRNA ligase, cytoplasmic 1135 1230 - -
Accr1g03613 1240 MobiDBLite consensus disorder prediction 1 33 - -
Accr1g03613 1240 Gene3D Ubiquitin Conjugating Enzyme 30 157 IPR016135 -
Accr1g03613 1240 SUPERFAMILY UBC-like 35 146 IPR016135 -
Accr1g03613 1240 ProSitePatterns Protein kinases ATP-binding region signature. 433 457 IPR017441 GO:0005524
Accr1g03613 1240 MobiDBLite consensus disorder prediction 265 286 - -
Accr1g03613 1240 Pfam Histidyl-tRNA synthetase 878 1121 IPR041715 -
Accr1g03613 1240 MobiDBLite consensus disorder prediction 1 16 - -
Accr1g03613 1240 CDD STKc_EIF2AK4_GCN2_rpt2 420 730 - -
Accr1g03613 1240 Coils Coil 981 1001 - -
Accr1g03613 1240 Gene3D Bira Bifunctional Protein; Domain 2 793 1128 IPR045864 -
Accr1g03613 1240 MobiDBLite consensus disorder prediction 226 331 - -
Accr1g03613 1240 FunFam eIF-2-alpha kinase GCN2 415 545 - -
Accr1g03613 1240 SMART RWD2001b 40 149 IPR006575 GO:0005515
Accr1g03613 1240 ProSitePatterns Tyrosine protein kinases specific active-site signature. 584 596 IPR008266 GO:0004672|GO:0006468
Accr1g03613 1240 ProSiteProfiles RWD domain profile. 40 149 IPR006575 GO:0005515
Accr1g03613 1240 FunFam eIF-2-alpha kinase GCN2 549 742 - -
Accr1g03613 1240 SUPERFAMILY Protein kinase-like (PK-like) 423 741 IPR011009 -
Accr1g03613 1240 Pfam RWD domain 37 145 IPR006575 GO:0005515
Accr1g03613 1240 Gene3D Transferase(Phosphotransferase) domain 1 549 740 - -
Accr1g03613 1240 SUPERFAMILY Class II aaRS ABD-related 1139 1230 - -
Accr1g03613 1240 MobiDBLite consensus disorder prediction 310 327 - -
Accr1g03613 1240 Pfam Protein kinase domain 427 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03613 1240 Pfam Anticodon binding domain of tRNAs 1139 1232 IPR024435 -
Accr1g03613 1240 Gene3D - 1135 1231 IPR036621 -
Accr1g03613 1240 PANTHER HISTIDYL-TRNA SYNTHETASE 788 1234 - -
Accr1g03613 1240 ProSiteProfiles Protein kinase domain profile. 427 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03613 Accr-Chr1 72706184 72770299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03613 427 732 MAP Kinase Kinase Kinase AT1G63700 26.603 2.04e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Accr1g03613 Pkinase 5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03613 K16196 - gmx:100797996 1842.4