LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr1g03590	ATGTTCTTCTCTGGCCAAACGCGATCACAAGTTGCTCAACACAAGTCCACCAAAGATTGTTGGCTGGTGGTGTATGGCAGAGTGCTGAATTTGACCAAGTTCTTAGAGGAGCACCCAGGAGGGGAAGAGGTTCTGCTAGAAGTGGCAGGTAAGGATGCGAGCAAGGAGTTCGATACTATTGGGCACAACGAGGGAGCTAAAAAGATGTTCGCCAAGTTCCAGGTAGGGGTACTCCAAGGTCACTCAATTCAAGATCTGGGTGGCAAAGACGATGCCACCAACGAATCCAAGAAAGAGATGAGTGCCTTTGTCATCAAAGATGACTCTTCTTCCACATTCAAGTCCCTCTTTTTGACTTCTTCGTTCCTTTCATGGTTGCTTCTCTCTATTTTGGTTACAATCGTCACTAGATCTGACAGGAACGTGTTTTTGTTTTCTCCAAAATGTTGA	450	0.4578	MFFSGQTRSQVAQHKSTKDCWLVVYGRVLNLTKFLEEHPGGEEVLLEVAGKDASKEFDTIGHNEGAKKMFAKFQVGVLQGHSIQDLGGKDDATNESKKEMSAFVIKDDSSSTFKSLFLTSSFLSWLLLSILVTIVTRSDRNVFLFSPKC	149

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g03590	149	Pfam	Cytochrome b5-like Heme/Steroid binding domain	7	78	IPR001199	-
	Accr1g03590	149	ProSiteProfiles	Cytochrome b5 family, heme-binding domain profile.	7	79	IPR001199	-
	Accr1g03590	149	SUPERFAMILY	Cytochrome b5-like heme/steroid binding domain	7	83	IPR036400	-
	Accr1g03590	149	PANTHER	CYTOCHROME B5	7	128	-	-
	Accr1g03590	149	PRINTS	Cytochrome B5 signature	28	38	IPR001199	-
	Accr1g03590	149	PRINTS	Cytochrome B5 signature	38	52	IPR001199	-
	Accr1g03590	149	PRINTS	Cytochrome B5 signature	66	78	IPR001199	-
	Accr1g03590	149	PRINTS	Cytochrome B5 signature	53	60	IPR001199	-
	Accr1g03590	149	SMART	Cyt_b5_2	6	79	IPR001199	-
	Accr1g03590	149	Gene3D	-	5	85	IPR036400	-
	Accr1g03590	149	ProSitePatterns	Cytochrome b5 family, heme-binding domain signature.	34	41	IPR018506	GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g03590	Accr-Chr1	72292695	72293225	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr1g03590	7	76	NADPH P450 reductases	AT5G48810	51.429	2.03e-24	90.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g03590	-		-	twl:120010705	137.117