Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03581 ATGGATTCAGCAACTCCACCGTCGCCGGAGCTCAAACTCGACCACCTAAGAGCTCTCAAGGTGGTCGGCAAGGGTGCCATGGGGACGGTCTTCCTCGTCTACGACATGGTAGCGGATCCTTATGCTCGCAGTCCCTTCGCCCTGAAGGTCGTCGAGAAATCCTCCGTCCAGAACAAGCTCGACGCCGACCGTCGAGCCCGGTGGGAAATCCATGTCCTCTCTCGCTTGGCCCACCCTTTTCTTCCTTCCCTCTTAGGGACATTTGAGAACCATCAATTGTTGGCCTGGGCCATCCCCTATTGTCCGGGAGGCGACCTCAACGTCCTTCGTTACCGTCAGAGTGATAGGGTCTTCGCCCCTGCCGTCATTCGCTTCTATTTGGCCGAGATCATCTGCGCTTTAGACCATATTCATGCCCTGGGTATCGCCTACCGTGATTTGAAGCCGGAGAACGTCCTTGTCCAGCAGTCCGGTCACGTGACCCTCACCGACTTCGATCTCTCTTGCAACCTCACCCCCAAAACCATCCCACAAAATCTGTCCGATAACCGCAGCAAGCATCGCAGGAATTTCACGCGCTGGATTCCTGTCCCGCCAGACATTTTTCACAGCAGAAAAGGTTTGAAGAAGGCCAAGTCCGCCAAAGTCATCCCAGTGAGCAGAAGGAAACCGAGCTTCTCAAATGGCGAGCGTTCTAACTCGTTCGTTGGAACAGAAGAATACGTTTCGCCCGAGGTCGTCGGTGGCGACGGACACGAGTTCGCAGTCGACTGGTGGGCCGTCGGCATATTGACGTACGAGATGATGTATGGCACGACGCCGTTTAAGGGAAGGAACCGCAAAGAAACCTTTCGTAACATCTTGACGAAGGCGCCAGTGTTCGTGGGGAAGCCAACGACGCTGACCGACCTCATCCAACGCCTGCTGGAGAAAGACCCCACAAAGCGATTGGGTTACGTGCGCGGTGCAAGCGAGATCAAGGAGCACGAGTTCTTCAGAGGGGTCCGGTGGGACCTACTAACGGAGGTTGTACGGCCGCCGTTCATTCCGTCCAGAGAGGAGGCGGACTGGACCTGGACGGAGCGATTCAGCGGGGGCGGGGTGGAGATAGGGGAATACTTTGAGAGGCAAAGATCGCCGCCGTCACCGGAGAAAGGGTGGGATATATGTTTAACAGAATTGTAA 1185 0.5586 MDSATPPSPELKLDHLRALKVVGKGAMGTVFLVYDMVADPYARSPFALKVVEKSSVQNKLDADRRARWEIHVLSRLAHPFLPSLLGTFENHQLLAWAIPYCPGGDLNVLRYRQSDRVFAPAVIRFYLAEIICALDHIHALGIAYRDLKPENVLVQQSGHVTLTDFDLSCNLTPKTIPQNLSDNRSKHRRNFTRWIPVPPDIFHSRKGLKKAKSAKVIPVSRRKPSFSNGERSNSFVGTEEYVSPEVVGGDGHEFAVDWWAVGILTYEMMYGTTPFKGRNRKETFRNILTKAPVFVGKPTTLTDLIQRLLEKDPTKRLGYVRGASEIKEHEFFRGVRWDLLTEVVRPPFIPSREEADWTWTERFSGGGVEIGEYFERQRSPPSPEKGWDICLTEL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03581 394 ProSiteProfiles Protein kinase domain profile. 16 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03581 394 Gene3D Transferase(Phosphotransferase) domain 1 105 173 - -
Accr1g03581 394 FunFam Serine/threonine-protein kinase OXI1 230 351 - -
Accr1g03581 394 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Accr1g03581 394 Gene3D Transferase(Phosphotransferase) domain 1 229 351 - -
Accr1g03581 394 Gene3D Phosphorylase Kinase; domain 1 16 104 - -
Accr1g03581 394 FunFam Serine/threonine-protein kinase OXI1 105 173 - -
Accr1g03581 394 SMART serkin_6 16 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03581 394 Pfam Protein kinase domain 227 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03581 394 Pfam Protein kinase domain 19 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03581 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Accr1g03581 394 SUPERFAMILY Protein kinase-like (PK-like) 13 359 IPR011009 -
Accr1g03581 394 PANTHER FLIPPASE KINASE 1-RELATED 10 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03581 Accr-Chr1 72246157 72247341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03581 7 383 AGC Kinase Gene Family AT1G51170 60.506 6.75e-162 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr1g03581 Pkinase 7.9e-30 CL0016