Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03577 ATGATGAGCGACCCCCACCTCTCCAATGCCTTCAACTTTCCCTCTGCTAACTCGTCTTCTCTCACTTTACCCTCTCCTCCTCCAAGAGAAGCCCTACCTCTCCTTAACCTAAGCCCTCCAACTGAGTACAAGGAAGCACAAGGAGACATGGGATGTAGTTCTTTGAACTTGCAATTACACCTAGGCCTTCCTACCTCCTCAGACAAAGATGAAGTCCCGACGACTGTACCTTGTGGCTATCTCTCTCATAGGATCACTCCGGCTGCTCAGTACTGGATCCCTTCCCCTTCCCAGATTCTGATTGGCCCCACACACTTCTCCTGCCCTCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCAGAATATAGAAGAGGAGCAGAGTCTCTAAGGGGAACACAGCCAACGGCAATGCTGAGGCTTCCGTGCTATTGCTGTGCACAAGGGTGCAAGAACAACATCGAGCATCCGAGGGCCAAGCCTCTCAAGGATTTCAGAACCCTTCAAACCCATTACAAGAGAAAGCACGGCATCAAGCCCTTCATGTGCAGAAAATGTTGCAAAGCCTTTGCTGTGAGAGGTGATTGGAGAACTCACGAGAAGAACTGCGGCAAGCTCTGGTATTGCTCCTGTGGCTCTGACTTCAAGCATAAAAGATCTCTTAAAGACCATATCAAGGCTTTCGGACATGCCCACACGCCTTGTGGTGTTGATAATTGTCTCCATCATCAGGAAGTGGCCTCTGAAATTGACCACCCAAATGATTCCTTCCATTCTCATCATAGTAGCTAA 819 0.4872 MMSDPHLSNAFNFPSANSSSLTLPSPPPREALPLLNLSPPTEYKEAQGDMGCSSLNLQLHLGLPTSSDKDEVPTTVPCGYLSHRITPAAQYWIPSPSQILIGPTHFSCPLCFKTFNRYNNMQMHMWGHGSEYRRGAESLRGTQPTAMLRLPCYCCAQGCKNNIEHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHAHTPCGVDNCLHHQEVASEIDHPNDSFHSHHSS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03577 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Accr1g03577 272 MobiDBLite consensus disorder prediction 16 36 - -
Accr1g03577 272 SMART c2h2final6 153 185 IPR013087 -
Accr1g03577 272 SMART c2h2final6 216 239 IPR013087 -
Accr1g03577 272 SMART c2h2final6 106 128 IPR013087 -
Accr1g03577 272 SMART c2h2final6 190 210 IPR013087 -
Accr1g03577 272 SUPERFAMILY beta-beta-alpha zinc fingers 172 210 IPR036236 -
Accr1g03577 272 SUPERFAMILY beta-beta-alpha zinc fingers 97 129 IPR036236 -
Accr1g03577 272 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Accr1g03577 272 PANTHER ZINC FINGER PROTEIN WIP2 15 259 IPR043584 GO:0003700|GO:0010468
Accr1g03577 272 FunFam Zinc finger protein WIP2 159 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03577 Accr-Chr1 72197375 72199001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03577 18 247 C2H2 Transcription Factor Family AT1G51220 60.741 6.94e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g03577 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03577 - - qsa:O6P43_000130 382.489