Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03574 ATGAACCCTCAGTCTCAGAAGGCAACATCTGAAGCTAATAGAATGCATGATCTTAAGATCCCTTTGCTGCAGACTTCGCAAAATGCCACGCTCAGGGAGATAAAATTTAGAATACAAGATATTACTTGTGCATCCTGTGTAAATTCAATAGAATCTGTAGTTGGAAACCTTGATGGAGTTAATTGTGTAATGGTATCAGCAATTGATGGCAAAGCTACAATCAAATATATGCCAGAGCTCATCAGTGCCAAGAAAATAAAAGAATCTGTAGAAGAAGCAGGTTTTAGAGTTCACGAGCTATCAGAGCAAGACATATCAGTATGTAAAGTCAGGATTAAAGGAATGGCATGCACAAGCTGCTCTGAATCTGTTGAGCGTGCTCTCCAAATGGTCGATGGTGTGAAAAAAGCAGCAGTAGGCCTGGCTTTAGGAGAAGCAAAAGTACATTTTGATCCTAATTTCACTGATGTAAAAAAAATAATTGAAGTAATAGAAGACGCTGGCTTTGGAGTAGATCTCATTAGCTCAGGGACTGATGTGAATAAAGTGCATCTAAGACTTGAAGGACTTGATTCTCCAGATGATGTCAATGTTGTAATGTCATCTCTTGAATTAGCTGAAGGTGTAAATCATGTTGAGATGGACTTGACAGAACGTAAAGTTACAATTACCTATGATCCAGATGTTACAGGTCCCAGATCTCTTATACAGTGCATTCAAGCAGCTGCTCATGGCCCCAGTGGATATCATGCAACCTTGTACTCTCATTCAAGACAAAGAGAAACAAGGAGCATGGATGAAATTCATATGTATAGGGATCAGTTTTTGTTCAGCTGCTTATTTTCAGTTCCCGTGTTCTTATTTGCCATGGTACTTCCCATGCTTCCTCCGTATGGCAATTGGTTGAACTATAAGATCCACAGTATGTTAACTATTGGAATGTTTCTAAGATGGATCCTTAGCACTCCTGTTCAGTTCATAGTTGGCAAAAGGTTCTATGTTGGATCATATCATGCACTGAGGCGAAGATCTGCTAACATGGATGTGCTAGTTGCACTTGGCACTAATGCTGCGTATTTTTACTCTATTTATATTCTAATAAAAGCGCTCACTTCAGTAACATTTCAAGGACAAGATTTCTTTGAGACCAGTTCCATGTTAATATCCTTTATTCTGTTGGGAAAATATTTGGAGGTTGTGGCTAAAGGGAAAACATCAGATGCTTTGGCAAAGTTGACACAACTTGTTCCTGATAAAGTCTGTTTATTAGCCCTAGATGCTGAGGGAAATGTCATCTCTGAGACAGAAGTTGACACTCAACTTATACAAAGGAACGACGTTATTAAAATTGTTCCAGGGGCCAAAATTCCTGTCGATGGTATTGTTATAAAAGGGCAAAGTTATGTAAATGAAAGTATGATCACAGGTGAGGCAACACCTATTGATAAAAGTCCAGGAGACAAGGTTATTGGTGGGACCGTGAATGAGAATGGCTGCTTAGTTGTTAAGGCCACACATGTTGGAGCTGAAACCGCACTTTCTCAAATTGTTCAACTTGTAGAAGCTGCTCAACTTGCTAAAGCACCGATCCAAAAACTTGCTGACCATATTTCAAAATTTTTTGTTCCAATAGTGGTTGTTGCAGCATTCATAACCTGGCTGGGATGGTTTATTCCTGGCGAAGCTGGCATTTACCCTAAGTATTGGATACCAAAAGCTATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCAGTTCTAGTTGTTGCCTGCCCATGTGCTCTGGGTCTAGCAACACCAACAGCAGTCATGGTTGCTTCAGGTATTGGTGCTTCTCAAGGGGTACTCATCAAGGGAGGAGATGCACTGGAAAAGGCGCACAAGGTGAAAGTTGTTGTGTTTGATAAGACAGGGACACTTACCATTGGAAAACCAGAGGTAGTTAGTGCAGTGCTATTTTCTGAATTTTTGATGGAGGAGTTATGTGACATGGCCATTGCCGTGGAGGCAAGCAGTGAACACCCAATAGCAAAAGCTGTTGTGGTTTATGCAAAGAGGCAGCGCCAGCAGTTTGGGTCTAGTGCTGAGCAAGTCTTCGATGTGAAGGACTTTGAGGTGCACGTTGGGGCTGGGGTAAGTGGAAAAGTTGGTGTGAGAACAGTTTTAGTTGGGAACAAACGACTAATGCATTCTCGTAGCGTTCCAATAAGTGGCGAGGTTGAAAGGTATGTTTCTGAAAATGAAGTTCTGGCTAGAACGTGTGTGTTAGTTTCAATTGACGGAAAGATTGCTGGAGCTTTCTCTGTAACTGATCCCGTAAAGCCCGGGGCTAAGCGAGTGATATCTTTTCTGCACACCATGGGCATCTTAAGCATCATGGTGACCGGTGATAACCGCGCTACTGCAACTGCTATTGCAGATGAAGTGGGTATTGACAAGGTATTTGCTGAGACTGATCCACTGGGAAAAGCAGATAAGGTTAAAGACTTACAGATGAAAGGCATGGTGGTGGCAATGGTGGGCGATGGAATCAATGACTCGCCAGCTTTAGTTGCTGCTGACGTGGGCATGGCCATTGGTGCTGGGACTGACGTAGCCCTAGAGGCAGCTGATATAGTTCTGGTGAAAAGCAGCTTGGAGGATGTAATAACAGCCATAGATCTGTCGAGAAGGACCATGTCTCGTATCCGTCTAAACTACATATGGGCTCTGGGTTACAACATTCTGGGCATGCCAATTGCTGCCGGCATCTTGTACCCTTTCACCGGAATCAGGCTGCCCCCGTGGCTTGCTGGTGCCTGCATGGCCGCTTCTTCTCTGAGTGTTGTTTGTTCCTCTCTCTTGTTGCAGCTCTACAAGAAACCTTTGCACACGGCATCCGCTTGA 2889 0.4299 MNPQSQKATSEANRMHDLKIPLLQTSQNATLREIKFRIQDITCASCVNSIESVVGNLDGVNCVMVSAIDGKATIKYMPELISAKKIKESVEEAGFRVHELSEQDISVCKVRIKGMACTSCSESVERALQMVDGVKKAAVGLALGEAKVHFDPNFTDVKKIIEVIEDAGFGVDLISSGTDVNKVHLRLEGLDSPDDVNVVMSSLELAEGVNHVEMDLTERKVTITYDPDVTGPRSLIQCIQAAAHGPSGYHATLYSHSRQRETRSMDEIHMYRDQFLFSCLFSVPVFLFAMVLPMLPPYGNWLNYKIHSMLTIGMFLRWILSTPVQFIVGKRFYVGSYHALRRRSANMDVLVALGTNAAYFYSIYILIKALTSVTFQGQDFFETSSMLISFILLGKYLEVVAKGKTSDALAKLTQLVPDKVCLLALDAEGNVISETEVDTQLIQRNDVIKIVPGAKIPVDGIVIKGQSYVNESMITGEATPIDKSPGDKVIGGTVNENGCLVVKATHVGAETALSQIVQLVEAAQLAKAPIQKLADHISKFFVPIVVVAAFITWLGWFIPGEAGIYPKYWIPKAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGIGASQGVLIKGGDALEKAHKVKVVVFDKTGTLTIGKPEVVSAVLFSEFLMEELCDMAIAVEASSEHPIAKAVVVYAKRQRQQFGSSAEQVFDVKDFEVHVGAGVSGKVGVRTVLVGNKRLMHSRSVPISGEVERYVSENEVLARTCVLVSIDGKIAGAFSVTDPVKPGAKRVISFLHTMGILSIMVTGDNRATATAIADEVGIDKVFAETDPLGKADKVKDLQMKGMVVAMVGDGINDSPALVAADVGMAIGAGTDVALEAADIVLVKSSLEDVITAIDLSRRTMSRIRLNYIWALGYNILGMPIAAGILYPFTGIRLPPWLAGACMAASSLSVVCSSLLLQLYKKPLHTASA 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03574 962 SUPERFAMILY HMA, heavy metal-associated domain 177 251 IPR036163 GO:0046872
Accr1g03574 962 Gene3D - 26 105 - -
Accr1g03574 962 Gene3D - 106 177 - -
Accr1g03574 962 PRINTS Copper-transporting ATPase 1 signature 130 151 - -
Accr1g03574 962 PRINTS Copper-transporting ATPase 1 signature 59 82 - -
Accr1g03574 962 PRINTS Copper-transporting ATPase 1 signature 33 58 - -
Accr1g03574 962 NCBIfam heavy metal translocating P-type ATPase 347 950 IPR027256 GO:0006812|GO:0016020|GO:0019829
Accr1g03574 962 ProSitePatterns E1-E2 ATPases phosphorylation site. 636 642 IPR018303 -
Accr1g03574 962 SFLD Haloacid Dehalogenase 616 893 - -
Accr1g03574 962 SFLD p-type atpase 616 893 IPR044492 -
Accr1g03574 962 PRINTS P-type cation-transporting ATPase superfamily signature 634 648 - -
Accr1g03574 962 PRINTS P-type cation-transporting ATPase superfamily signature 864 876 - -
Accr1g03574 962 PRINTS P-type cation-transporting ATPase superfamily signature 766 777 - -
Accr1g03574 962 PRINTS P-type cation-transporting ATPase superfamily signature 470 484 - -
Accr1g03574 962 PRINTS P-type cation-transporting ATPase superfamily signature 788 798 - -
Accr1g03574 962 PRINTS P-type cation-transporting ATPase superfamily signature 841 860 - -
Accr1g03574 962 Pfam Heavy-metal-associated domain 36 95 IPR006121 GO:0046872
Accr1g03574 962 Pfam Heavy-metal-associated domain 110 169 IPR006121 GO:0046872
Accr1g03574 962 SUPERFAMILY Calcium ATPase, transduction domain A 435 520 IPR008250 -
Accr1g03574 962 SUPERFAMILY HAD-like 632 947 IPR036412 -
Accr1g03574 962 Gene3D - 645 774 IPR023299 GO:0000166
Accr1g03574 962 SUPERFAMILY HMA, heavy metal-associated domain 104 176 IPR036163 GO:0046872
Accr1g03574 962 ProSiteProfiles Heavy-metal-associated domain profile. 181 247 IPR006121 GO:0046872
Accr1g03574 962 FunFam Copper-transporting ATPase HMA5 105 176 - -
Accr1g03574 962 NCBIfam copper ion binding protein 110 171 IPR006122 GO:0005507
Accr1g03574 962 NCBIfam copper ion binding protein 34 97 IPR006122 GO:0005507
Accr1g03574 962 Pfam E1-E2 ATPase 433 612 - -
Accr1g03574 962 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 23 957 - -
Accr1g03574 962 CDD HMA 109 171 IPR006121 GO:0046872
Accr1g03574 962 FunFam Probable copper-transporting ATPase HMA5 760 898 - -
Accr1g03574 962 Gene3D - 402 524 - -
Accr1g03574 962 SUPERFAMILY Calcium ATPase, transmembrane domain M 379 908 IPR023298 -
Accr1g03574 962 NCBIfam HAD-IC family P-type ATPase 387 918 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g03574 962 SUPERFAMILY HMA, heavy metal-associated domain 29 103 IPR036163 GO:0046872
Accr1g03574 962 ProSitePatterns Heavy-metal-associated domain. 112 141 IPR017969 GO:0046872
Accr1g03574 962 CDD P-type_ATPase_Cu-like 275 937 - -
Accr1g03574 962 Gene3D - 179 256 - -
Accr1g03574 962 ProSiteProfiles Heavy-metal-associated domain profile. 32 98 IPR006121 GO:0046872
Accr1g03574 962 CDD HMA 35 98 IPR006121 GO:0046872
Accr1g03574 962 FunFam Copper-transporting ATPase 1, putative 402 524 - -
Accr1g03574 962 FunFam ATPase copper transporting beta 28 102 - -
Accr1g03574 962 CDD HMA 185 252 IPR006121 GO:0046872
Accr1g03574 962 Gene3D - 625 891 IPR023214 -
Accr1g03574 962 ProSiteProfiles Heavy-metal-associated domain profile. 106 172 IPR006121 GO:0046872
Accr1g03574 962 Pfam haloacid dehalogenase-like hydrolase 630 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03574 Accr-Chr1 72169288 72174263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03574 36 956 Primary Pumps ATPases AT1G63440 57.174 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03574 K17686 - gmx:100793894 1535.01