Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03555 ATGTATGGATTTGCTCTGCCTCTAACTGGAAACAATTTCCTTAACTGCGCTAAACTGTGTTTTAGATCCCTCGGACCATCCCTGCTCCTGCAAAACCTAGCTAATTCTTCCTTACCCAATAGTGCATTCAGTCATCGATGTGATTTTAGTCCCCTTCTATTCCAATCGGGATCGTGCTGGAACTATAGGAAATATACAAGAGACAGCATCACTCTTCTGAAAGCCAGCCGTCGGGAGTCTCCTTTTGAAGTTTTGGGCGTATCTCCATCAGCAACTGCGGATGAAATAAAAAAGGCATACAGAAAGCTTGCTCTTAAGTATCATCCCGATGTCAATAAAGAGGACAAGGCACAGGAGAAGTTTATGAGGATAAAACACGCGTACAATACATTGATAAATTCTACTTCGCGTATAAAATTTGATTCTGGAAATAGTGGTTCCAATTCTTATTATTCCTCTCAGAGAAGCCAAAGTGGCACTGCAAAGGAGGAGGAAGAATTTTATGGATTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGAGGATTTTTTCAAAGATCTTCAAGAAGAATTCAGAAACTGGGAAGCAAACTCTACTTCACAAGGAAAGCCGAAGAGCCTATGGGAGGAATTGGCAGAAATAGGGGAAGAATTTGTGGAGTTTCTGGAGAAAGAGCTTAATATAGTTGATCCAGAAGTTGATTCGAATGAGAATTATAAGAAGCCTCAAGAAGCAAATCCTTCTCGTACTTATGCTGGCAGTGGCCCTCAAGATGAAACTGGCAAGGGGAACAGCAGCATTAAGGATAACCTTGATGAAATAGAAGCTACTCTTGCTCAGTTAAAAAAGGAATTAGGTTTGTAG 867 0.4025 MYGFALPLTGNNFLNCAKLCFRSLGPSLLLQNLANSSLPNSAFSHRCDFSPLLFQSGSCWNYRKYTRDSITLLKASRRESPFEVLGVSPSATADEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSTSRIKFDSGNSGSNSYYSSQRSQSGTAKEEEEFYGLGNFLRDVQITIEDFFKDLQEEFRNWEANSTSQGKPKSLWEELAEIGEEFVEFLEKELNIVDPEVDSNENYKKPQEANPSRTYAGSGPQDETGKGNSSIKDNLDEIEATLAQLKKELGL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03555 288 Gene3D DnaJ domain 77 201 IPR036869 -
Accr1g03555 288 ProSiteProfiles dnaJ domain profile. 80 144 IPR001623 -
Accr1g03555 288 ProSitePatterns Nt-dnaJ domain signature. 121 140 IPR018253 -
Accr1g03555 288 MobiDBLite consensus disorder prediction 143 158 - -
Accr1g03555 288 SUPERFAMILY Chaperone J-domain 76 147 IPR036869 -
Accr1g03555 288 Pfam DnaJ domain 81 141 IPR001623 -
Accr1g03555 288 Coils Coil 265 288 - -
Accr1g03555 288 SMART dnaj_3 79 136 IPR001623 -
Accr1g03555 288 MobiDBLite consensus disorder prediction 241 265 - -
Accr1g03555 288 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 46 232 - -
Accr1g03555 288 PRINTS DnaJ domain signature 116 136 IPR001623 -
Accr1g03555 288 PRINTS DnaJ domain signature 100 115 IPR001623 -
Accr1g03555 288 PRINTS DnaJ domain signature 82 100 IPR001623 -
Accr1g03555 288 CDD DnaJ 81 133 IPR001623 -
Accr1g03555 288 MobiDBLite consensus disorder prediction 143 162 - -
Accr1g03555 288 MobiDBLite consensus disorder prediction 234 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03555 Accr-Chr1 71970820 71973252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03555 76 145 C2H2 Transcription Factor Family AT1G74250 36.842 1.35e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03555 - - qsa:O6P43_028201 370.933