Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03554 ATGTATGGATTTGCTCTGCCTCTAACTGGAAACAATTTCCTTAACTGCGCTAAACTGTGTTTTAGATCCCTCGGACCATCCCTGCTCCTGCAAAACCTAGCTAATTCTTCCTTACCCAATAGTGCATTCAGTCATCGATGTGATTTTAGTCCCCTTCTATTCCAATCGGGATCGTGCTGGAACTATAGGAAATATACAAGAGACAGCATCACTCTTCTGAAAGCCAGCCGTCGGGAGTCTCCTTTTGAAGTTTTGGGCGTATCTCCATCAGCAACTGCGGATGAAATAAAAAAGGCATACAGAAAGCTTGCTCTTAAGTATCATCCCGATGTCAATAAAGAGGACAAGGCACAGGAGAAGTTTATGAGGATAAAACACGCGTACAATACATTGATAAATTCTACTTCGCGTATAAAATTTGATTCTGGAAATAGTGGTTCCAATTCTTATTATTCCTCTCAGAGAAGCCAAAGTGGCACTGCAAAGGAGGAGGAAGAATTTTATGGATTAGAGGATTTTTTCAAAGATCTTCAAGAAGAATTCAGAAACTGGGAAGCAAACTCTACTTCACAAGGAAAGCCGAAGAGCCTATGGGAGGAATTGGCAGAAATAGGGGAAGAATTTGTGGAGTTTCTGGAGAAAGAGCTTAATATAGTTGATCCAGAAGTTGATTCGAATGAGAATTATAAGAAGCCTCAAGAAGCAAATCCTTCTCGTACTTATGCTGGCAGTGGCCCTCAAGATGAAACTGGCAAGGGGAACAGCAGCATTAAGGATAACCTTGATGAAATAGAAGCTACTCTTGCTCAGTTAAAAAAGGAATTAGGTTTGTAG 834 0.4077 MYGFALPLTGNNFLNCAKLCFRSLGPSLLLQNLANSSLPNSAFSHRCDFSPLLFQSGSCWNYRKYTRDSITLLKASRRESPFEVLGVSPSATADEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSTSRIKFDSGNSGSNSYYSSQRSQSGTAKEEEEFYGLEDFFKDLQEEFRNWEANSTSQGKPKSLWEELAEIGEEFVEFLEKELNIVDPEVDSNENYKKPQEANPSRTYAGSGPQDETGKGNSSIKDNLDEIEATLAQLKKELGL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03554 277 Coils Coil 254 274 - -
Accr1g03554 277 MobiDBLite consensus disorder prediction 221 261 - -
Accr1g03554 277 ProSiteProfiles dnaJ domain profile. 80 144 IPR001623 -
Accr1g03554 277 PRINTS DnaJ domain signature 116 136 IPR001623 -
Accr1g03554 277 PRINTS DnaJ domain signature 100 115 IPR001623 -
Accr1g03554 277 PRINTS DnaJ domain signature 82 100 IPR001623 -
Accr1g03554 277 MobiDBLite consensus disorder prediction 230 254 - -
Accr1g03554 277 ProSitePatterns Nt-dnaJ domain signature. 121 140 IPR018253 -
Accr1g03554 277 MobiDBLite consensus disorder prediction 143 158 - -
Accr1g03554 277 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 46 214 - -
Accr1g03554 277 SUPERFAMILY Chaperone J-domain 76 147 IPR036869 -
Accr1g03554 277 SMART dnaj_3 79 136 IPR001623 -
Accr1g03554 277 CDD DnaJ 81 133 IPR001623 -
Accr1g03554 277 Gene3D DnaJ domain 77 190 IPR036869 -
Accr1g03554 277 MobiDBLite consensus disorder prediction 143 162 - -
Accr1g03554 277 Pfam DnaJ domain 81 141 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03554 Accr-Chr1 71970820 71973252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03554 76 145 C2H2 Transcription Factor Family AT1G74250 36.842 1.35e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03554 - - qsa:O6P43_028201 341.273