Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03552 ATGCCGGAGATATGCTGCAGCGACGCCTCGGCGACGTGTCAGCCCAGCTCGCGTGAGGCCAGAAGGAGGCGAATAGAGATCAGGTGCTTGAAGGTCGTAGAGGGCGAGGAGAAGCGCCCCAAACTCCGCTCTGCTCCTCGAACCTCTCGGCACTCTGACTACGTCGTCGACAACTGTGCCGCTGGCACAGAGAAAGCCCTCGCGTTTCTCTCCTCCGGCCCGGCAAAGTCAGAGACCCATGACAAACATACTCCGGCCGACTCCTTTGACCCAACGTACTCCCCAGTCTTGGCAGGTCAGTATCCTAAATTTGGGGTTGCGTCGGTGTGTGGAAGGCGAAGAGACATGGAGGATGCGGTGGCCATCCATCCCTGTTTTTGCGGGGACCGTTACACCTCTGGTGAATTTCATTACTTTGGAGTCTACGATGGCCACGGTTGCTCTCATGTGGTGGTTAAGTGTAAGGATCGATTACATGAGTTGGTGAAAGAAGAGCTAGAGAAACAGGAATGGACGAAGGGGTGGGAGGGCGCGATGGAGCGAAGCTTTTCGCGGATGGACCAGGAGGTCATTGCTTGGAATGCTAATGTCTTGGAAGCCAATTATAGGTGTGAGCTTCAGTCCCCCGAGTGCGACGCCGTCGGATCTACGGCTGTCATTGCTGTTTTGACCGCAGACAAGGTCATCGTCGCCAACTGCGGCGATTCGAGGGCCGTGCTGTGCCGCAACGGCAAACCCATCCCCCTCTCTTCTGATCACAAGCCGGATCGTCCGGACGAGCTGAACCGGATCCATGAAGCGAGAGGACGGGTTATATACTGGGACGGACCACGCGTTCTGGGAATGCTTGCCATGTCAAGAGCCATAGGTGACAACTACTTAAAGCCTTACGTGACCTGCGTGCCGGAGGTGACGATAACGGATCGGACGTCCGAGGATGACTGTTTGATACTGGCAAGTGATGGGTTATGGGACGTGGTGTCGAATGAGACAGCATGTGGGGTGGCACGTATGTGTCTGCGAGGAAGAAACCACGCGCCAGCGAGACCAGAGGTGGCGTTGGAGGGCGAAATGGAAGGTGTTGTGATGAAGATGTCGGACAAAGCATGCTCTGATGCGTCAATGTTGCTGATGAAGCTTGCTTTGGCCAAGCACTCCACCGACAACGTCAGCGTACTGGTGGTGGATCTCAGGAGGAGGGCCTGA 1206 0.5605 MPEICCSDASATCQPSSREARRRRIEIRCLKVVEGEEKRPKLRSAPRTSRHSDYVVDNCAAGTEKALAFLSSGPAKSETHDKHTPADSFDPTYSPVLAGQYPKFGVASVCGRRRDMEDAVAIHPCFCGDRYTSGEFHYFGVYDGHGCSHVVVKCKDRLHELVKEELEKQEWTKGWEGAMERSFSRMDQEVIAWNANVLEANYRCELQSPECDAVGSTAVIAVLTADKVIVANCGDSRAVLCRNGKPIPLSSDHKPDRPDELNRIHEARGRVIYWDGPRVLGMLAMSRAIGDNYLKPYVTCVPEVTITDRTSEDDCLILASDGLWDVVSNETACGVARMCLRGRNHAPARPEVALEGEMEGVVMKMSDKACSDASMLLMKLALAKHSTDNVSVLVVDLRRRA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03552 401 SMART PP2C_4 91 395 IPR001932 -
Accr1g03552 401 PANTHER PROTEIN PHOSPHATASE 64 397 IPR015655 GO:0004722|GO:0006470
Accr1g03552 401 CDD PP2Cc 103 397 IPR001932 -
Accr1g03552 401 ProSiteProfiles PPM-type phosphatase domain profile. 103 397 IPR001932 -
Accr1g03552 401 SUPERFAMILY PP2C-like 100 398 IPR036457 -
Accr1g03552 401 FunFam Protein phosphatase 2C 50 129 401 - -
Accr1g03552 401 ProSitePatterns PPM-type phosphatase domain signature. 138 146 IPR000222 GO:0043169
Accr1g03552 401 Pfam Protein phosphatase 2C 104 389 IPR001932 -
Accr1g03552 401 Gene3D - 95 401 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03552 Accr-Chr1 71941348 71942946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03552 38 399 PP2C-type Phosphatase Gene Family AT2G29380 59.229 3.21e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03552 K14497 - cave:132163544 497.664