Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03546 ATGGATGACCAAGATTCTGAATTCTATGCAAGCTTGGTTTCCGCAAGCGCAGCTACTCAGAGTTCTATCACTCCTGTTCGGGTCATGGCCCGCAATATGTTCTCCGGGGACGCCTTTCTCGAAGAGTTTGATGGTTCCCCTGACAGGGAGGATGCTTCTCTTTCCTCGTTCTCAGATCGCGCCTCAGTCAGCGGGCTTATTTTTGGTGATGGATCTGTCAGATCATCTTCCGTTTCTCCGGCGAACATAGAATCTCCTGTTCATTCTGGCACCGGTTCAAATGAAGAATTTACGGAGAGTAACAAGTATTCCAACAATATTCTCAGATACATAAGCGACATCCTCATGGATGAAGAAGACGACCTGGAGAGTCAGCCCTGCATGTTGAAGCATTGTGTGGCACTCCAAGCTGCAGAAAAATCATTCTACGATGTCCTCACTCCCAGTAGTTCCGCATCGCCCCACCACAGCGGCAGCTACACCAGTACTGATCATTCGAGCGAGGCCGATTGGTCTTCTTATTTATGCCCCGATCCATTAACAGGGACACAAGAATGCGATTCTCAACCTGCAGGTGGTGAGATTCACACTTCAACAAGCAGTGGGGGGAGGGAAAAGAGGAGCCATGAGATAGATGACATTACAAATGAGGAAGAGGGGAGAGGAAGTAAGATTTCGGCGGCGTACAGGGAGGATTCAGAGCAATCGGAGGTGTTCGATGAGCTACTCGTTTTCCTGGGGGGAACAGGTCCGGGCGTGGCTCAAGAATCATCATCAAAAAATGTGAATTTGAACTCAAAAGGTAAGGCAAATCGTTCCAAGAAAGGGGCAAATAAAGGGGCAACAGTAGATTTGTGGACTCTGTTGACTCAATGTGCACAGGCAGTGGCAAACTTTGACCAAAGAAATGCAAATGAGCTTCTGAAGCAGATAAGGCAGCACTCTTCTCCTTTTGGGGATGGAATTGAGCGTTTGTCTCATTACCTTGCCAACGGACTGGAGATGCGTTTGGCTGCCGGGAAGCCATCTTTGACGCCGCTCGATGTCAACGGGGTTACTGCTGCTGATATGTTAAGAGCTTGCAAGCTATACATAACAGCATCTCCCTTTCAGAGAGTCACCAACTTCATGTCTGTCGGAATGATCATGAACCAAGTGGAGAACGGAAGAAGCCTTCATATTATTGATTTTGGGATCAACTATGGTTTCCAGTGGCCCTGCCTTATCCATCGTGTTTCAACAAGATCAGAAGGACCTATCAAGATCCGGATCACAGGAATCGATTTTCCCCAACCCGGATTTCGCCCCACTGAGAGGCTGGAGGAGACAGGCAAGCGTTTGGCTAATTATAGCAGAAGGTTCAATGTGCCATTTGAGTACAACTGCGTTGCAAAGAAATGGGAAACCATACAGCTTAAGGATCTCAAACTAGATCCAAGCGAGGTCACGATTGTGAACTGCATGTACAGAATGAAGAACCTGCCCGATGAGACTCTGGAGGTGGACTGTCCGAGAGATGCTGTTTTGAAGATCATCAGGAAGATTAAACCAAGCATCTTCATGCATGGAATTGCCAATGGCACCTATAATGCGCCATTTTTCCTAACTCGGTTCAAGGAGGCGCTGTTCCACTTCTCGACACTGTATGATATTCTTGAGGCTAACGTGGGGCGTGAAGATCCGCACAGGGTGGTGGTTGAGAAAGAGATTTTTGGGAGGGACGCCATGAATGTGATAGCGTGCGAGGGGGCAGAGAGAGTAGATAGGCCAGAGACGTACAAGCAGTGGCAGGCCAGGAACCAGAGAGCCGGATTCAAGCAAATCTACTTGGATGCAGAACGCATCAAGACAGCAAAAGAGTTTGTGAAGACGGAATACCATAAGGATTTTGCGGTGGATGTAAATGGCAAATGGGTTTTGCTGGGATGGAAAGGCCGCATTGTTCATGCTCTTTCCTGTTGGATGCCTGCTTAA 1974 0.4807 MDDQDSEFYASLVSASAATQSSITPVRVMARNMFSGDAFLEEFDGSPDREDASLSSFSDRASVSGLIFGDGSVRSSSVSPANIESPVHSGTGSNEEFTESNKYSNNILRYISDILMDEEDDLESQPCMLKHCVALQAAEKSFYDVLTPSSSASPHHSGSYTSTDHSSEADWSSYLCPDPLTGTQECDSQPAGGEIHTSTSSGGREKRSHEIDDITNEEEGRGSKISAAYREDSEQSEVFDELLVFLGGTGPGVAQESSSKNVNLNSKGKANRSKKGANKGATVDLWTLLTQCAQAVANFDQRNANELLKQIRQHSSPFGDGIERLSHYLANGLEMRLAAGKPSLTPLDVNGVTAADMLRACKLYITASPFQRVTNFMSVGMIMNQVENGRSLHIIDFGINYGFQWPCLIHRVSTRSEGPIKIRITGIDFPQPGFRPTERLEETGKRLANYSRRFNVPFEYNCVAKKWETIQLKDLKLDPSEVTIVNCMYRMKNLPDETLEVDCPRDAVLKIIRKIKPSIFMHGIANGTYNAPFFLTRFKEALFHFSTLYDILEANVGREDPHRVVVEKEIFGRDAMNVIACEGAERVDRPETYKQWQARNQRAGFKQIYLDAERIKTAKEFVKTEYHKDFAVDVNGKWVLLGWKGRIVHALSCWMPA 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03546 657 MobiDBLite consensus disorder prediction 147 169 - -
Accr1g03546 657 MobiDBLite consensus disorder prediction 253 276 - -
Accr1g03546 657 MobiDBLite consensus disorder prediction 73 99 - -
Accr1g03546 657 MobiDBLite consensus disorder prediction 182 233 - -
Accr1g03546 657 MobiDBLite consensus disorder prediction 253 271 - -
Accr1g03546 657 ProSiteProfiles GRAS family profile. 276 655 IPR005202 -
Accr1g03546 657 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 219 647 IPR005202 -
Accr1g03546 657 MobiDBLite consensus disorder prediction 200 233 - -
Accr1g03546 657 MobiDBLite consensus disorder prediction 182 199 - -
Accr1g03546 657 Pfam GRAS domain family 287 654 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03546 Accr-Chr1 71912187 71914160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03546 103 656 GRAS Transcription Factor Family AT2G29060 43.586 9.96e-161 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g03546 GRAS 8.8e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03546 - - gmx:100815586 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03546 1 71912187 71914160 Accr13g00157 13 1375364 1377688 CCT
Accr13g00156 13 1366289 1368613 Accr1g03546 1 71912187 71914160 CCT