Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03545 ATGAAACCGGACCTCTTTGTTCAATGCATTGCTAATGGGTCCTACAATGGCCCTTTCTTTGTTACACGGTTCAGGGAGGCACTGTTCCATTTCTCGGCTTTGTATGATATGTATGATACTTTGGTACCCCGTGAAAACCAATGGAGGTTGATGCTTGAGAAAGAAATGTATGGTCGGGCGGCTATGAACGTTGTGGCATGTGAAGGATTAGAAAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCAAGGGTTTCAAGGGCAGGTTTCAAGCAGCTCCCGCTGAATAGAGAGCTTATGGCCAAGTTCAGGGACAAGATCGAGGCGTGGTACCATAAAGATTTTCTGTTTGATGAAGACAGCAACTGGATGCTTCAGGGCTGGAAGGGACGTATTTTGTATGCCTCCACTTGTTGGGTTCCAGCATAA 432 0.4676 MKPDLFVQCIANGSYNGPFFVTRFREALFHFSALYDMYDTLVPRENQWRLMLEKEMYGRAAMNVVACEGLERVERPETYKQWQARVSRAGFKQLPLNRELMAKFRDKIEAWYHKDFLFDEDSNWMLQGWKGRILYASTCWVPA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03545 143 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 136 IPR005202 -
Accr1g03545 143 ProSiteProfiles GRAS family profile. 1 141 IPR005202 -
Accr1g03545 143 Pfam GRAS domain family 1 140 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03545 Accr-Chr1 71908536 71908967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03545 1 143 GRAS Transcription Factor Family AT1G07520 61.111 3.12e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g03545 GRAS 1.7e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03545 - - pvu:PHAVU_011G063200g 254.218