Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03544 ATGGATCCTAATTTGTCTGCGGCTCCTGATTTCAGGAATGGACACCGAATAGATGATGGCGCTGTCCTCTCTGGTACTAATCAATACCTAAATCTAGGAGATGACTGGAATCCTGACGAAGACCATCAGACCGCTCTTAATTACTACCGTTACACTTTTCAGCAACCTGAAGTGGACCCACTTAGTTATGCACCGCAAACAAGCTTGATATCTGAAGGAGCACTCCCGAATCCATCCTGGAGTGCGAGTTCTGTGGAAGGTGTGCCAGATGTCCTGTATTCAGCCGCAACTTCGGCTCCAGATCCTTCTGTAGAAGACTACGATTTTTCAGAAACCATCAAGTACATGAGCCAAGTTCTTATGGAAGAGAACTTGGAACAGAAGCCATCCATGTTTTATGATCCGCTCAGTCTAAAACATACTGAGAAATCATTCTATGATGCTCTTCAATACGACTCTCTCTCTCCCAATGAGCACCCTCTTATTGACACTGATGACAGCCCAGACGGTCATTTCTCTGAAACAGCTACTGATTCTTGTACCCGCGGCAGCAGCACCAGCACCAGCACCAGCACAAGCACTAACACAAGCCCCAACGACTTAGAATTAAGGACCGCTTCGCCAGATACGTCCGTTTTGGGAGATTATTCTTTCCAGTTCAAATCGCAATCCATATCTCAGCAGTCCTCACAACCTCCAAATACTTCAACTAATATCAGTGACGAACTGCTGAATTTGGATTCTTCTATTACTCAGCTTTTGGCTCAAAATATATTTAGTGACGCAGAATCTGTCTCGCAATTCAATAGAGGTTTAGAGGAAGCAAGCAAATTTCTTCCTAGAAGAGTTCAACTCGTCACTGGTCTGGAGAGCACCGCGGTGGCCGTACAGTCAAAGGTGGCGAGACGAAAGGCGCCGCTGAATACGGAGAAAGGGGCTAGGGAGAATTTGCATGGGTTGAAGGGTAGAAAGAATCACGACCGCGATGGTAGTGTTGATGAAGAAGAAGAAAGAAGCAAGAAGCAGTCAGCAGTGTATGTTGATGAGAGTGAATTATCGGAGATGTTTGACAAAGTGTTGCTTAGTGTTGAGAATGTTCCACTGTGTTCTGAGCACGAAAGCGTGCACTGTGGATCAGCGAAAGACTTGCAGACAAGCGAGCAGGCTGTGGAATCATCTGATGGAGAGAAGACACACTCTAAGAAACAAGGGAGGAAGAAGGAAACGGTGGATTTGAACACACTTTTGGTTTTATGTGCACAAGCCGTGTCTGCCAGCGATAGGAGGACTGCTCATGAATTACTAAAACAGATCAGGCAACATTCTTCACCCTTGGGGGATGCATCTCAGAGGGTGGCTCATTATTTCGCCAATGGCCTTGAGGCACGTTTGGTTGGTGGTGGTGCGGGAACCCAGCTATTTTATACTTCTCTGAGCTCCAAGAGGATCTCTGCTGCTGAAATTTTGAAAGCTTACCAAGTTTCAATCTCGGCCTCACCTTTTAAGAAGTTTGCACATTTCTTTGCAATAAAAATGATTTTAAAAGCAGCTGAAAAGGCAGAAACCCTCCATATTATTGATTTTGGTATCCTGTATGGTTTCCAGTGGCCAATGCTCCTCAAATTTCTCTCAAATAGAGATGGTGGACCTCCCAAGCTACGCATCACCGGAATAGAATTTCCCCAACCTGGCTTCCGTCCAACAGAAAGAATTGAGGAAACTGGTCGTCGTCTTGCTAACTATTGCAGTCGATTTAATGTTCCCTTTGAGTACAAAGCTATAGCATCACAAAACTGGGAAACCATCCAAATTGAGGACCTTAAGATTGAGAGGAATGAGGTACTTGCTGTGAACTGTTCGCTGAGGTTAAAGAATTTACTGGATGAGACAATTGAAGTGAATAGTCCTAGGAACGCAATTCTAAATCTAATAAGGAAGATGAAACCGGACCTCTTTGTTCAATGCATTGCTAATGGGTCCTACAATGGCCCTTTCTTTGTTACACGGTTCAGGGAGGCACTGTTCCATTTCTCGGCTTTGTATGATATGTATGATACTTTGGTACCCCGTGAAAACCAATGGAGGTTGATGCTTGAGAAAGAAATGTATGGTCGGGCGGCTATGAACGTTGTGGCATGTGAAGGATTAGAAAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCAAGGGTTTCAAGGGCAGGTTTCAAGCAGCTCCCGCTGAATAGAGAGCTTATGGCCAAGTTCAGGGACAAGATCGAGGCGTGGTACCATAAAGATTTTCTGTTTGATGAAGACAGCAACTGGATGCTTCAGGGCTGGAAGGGACGTATTTTGTATGCCTCCACTTGTTGGGTTCCAGCATAA 2370 0.4515 MDPNLSAAPDFRNGHRIDDGAVLSGTNQYLNLGDDWNPDEDHQTALNYYRYTFQQPEVDPLSYAPQTSLISEGALPNPSWSASSVEGVPDVLYSAATSAPDPSVEDYDFSETIKYMSQVLMEENLEQKPSMFYDPLSLKHTEKSFYDALQYDSLSPNEHPLIDTDDSPDGHFSETATDSCTRGSSTSTSTSTSTNTSPNDLELRTASPDTSVLGDYSFQFKSQSISQQSSQPPNTSTNISDELLNLDSSITQLLAQNIFSDAESVSQFNRGLEEASKFLPRRVQLVTGLESTAVAVQSKVARRKAPLNTEKGARENLHGLKGRKNHDRDGSVDEEEERSKKQSAVYVDESELSEMFDKVLLSVENVPLCSEHESVHCGSAKDLQTSEQAVESSDGEKTHSKKQGRKKETVDLNTLLVLCAQAVSASDRRTAHELLKQIRQHSSPLGDASQRVAHYFANGLEARLVGGGAGTQLFYTSLSSKRISAAEILKAYQVSISASPFKKFAHFFAIKMILKAAEKAETLHIIDFGILYGFQWPMLLKFLSNRDGGPPKLRITGIEFPQPGFRPTERIEETGRRLANYCSRFNVPFEYKAIASQNWETIQIEDLKIERNEVLAVNCSLRLKNLLDETIEVNSPRNAILNLIRKMKPDLFVQCIANGSYNGPFFVTRFREALFHFSALYDMYDTLVPRENQWRLMLEKEMYGRAAMNVVACEGLERVERPETYKQWQARVSRAGFKQLPLNRELMAKFRDKIEAWYHKDFLFDEDSNWMLQGWKGRILYASTCWVPA 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03544 789 MobiDBLite consensus disorder prediction 156 208 - -
Accr1g03544 789 MobiDBLite consensus disorder prediction 302 346 - -
Accr1g03544 789 ProSiteProfiles GRAS family profile. 403 787 IPR005202 -
Accr1g03544 789 MobiDBLite consensus disorder prediction 376 406 - -
Accr1g03544 789 MobiDBLite consensus disorder prediction 173 208 - -
Accr1g03544 789 Pfam GRAS domain family 413 786 IPR005202 -
Accr1g03544 789 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 350 782 IPR005202 -
Accr1g03544 789 MobiDBLite consensus disorder prediction 392 406 - -
Accr1g03544 789 MobiDBLite consensus disorder prediction 304 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03544 Accr-Chr1 71906598 71908967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03544 112 789 GRAS Transcription Factor Family AT1G07530 51.567 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g03544 GRAS 6.8e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03544 - - pcin:129314564 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03544 1 71906598 71908967 Accr13g00158 13 1384759 1387062 CCT
Accr13g00157 13 1375364 1377688 Accr1g03544 1 71906598 71908967 CCT
Accr1g03544 1 71906598 71908967 Accr1g03544 1 71906598 71908967 ECH