Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03537 ATGAAGTGCTTCCATTTCTCAAACGCTGGTGGAGATCCCCGAGAAGTCGATGACTCTGTGACCTCCAAGGCTTCCAAGCTCTCTTGGGCTCGCTCACTCAGCGTCGCTTCTTCTACCTTGGGCTCAAGGAGGTCTGAATTTGATTCTGATTCAAAGGACTTCTCCGATTCAGTCGAGTTCCATAAATTCTTGTCTCAGAAGCGAGCTAATGATTTGCGCGTGTTTTCCTTCTCCGAGCTTAAATTGGCAACTCGTGGGTTTAGCAGAGCCCTTTTGATTGGAGAGGGAGGGTTTGGTTGTGTCTACAAAGGGGTTGTCAGGGTACCCAACGGGCATGCAAATGACGGTTCTCTTTCCGATATGGATGTTGCGATCAAGCAATTGAACCGCAATGGACCCCAGGGGCACAGAGAATGGATCAATGAAGTGAACTTGCTGGGTGTAATCAAGCATCCAAATCTTGTGAAGTTAGTGGGATATTGCGCTGAAGATGATGAAAGGGGAATTCAGAGACTTTTAGTCTATGAGCTTATGAGGAATAAGAGCTTGGAAGATCATCTTTTGGGTCGAGTGCCATCAACACTCACGTGGATATCAAGGTTAAAAATTGCTCAGGATGCTGCCCGGGGATTGGGATATCTACATGAAGAAATGGATTTTCAGCTTATTTTTCGGGATTTCAAGACATCCAATGTCCTGCTGGATGAGGACTTCAATGCAAAGCTTTCTGATTTCGGATTTGCTAGGCAAGGACCCTCAGAAGGATTTGGTCATGTTTCTACATCTGTTGTGGGAACTGTTGGTTATGCCGCACCGGAGTATGTTCATACTGGTAAGCTAACAGCTAAGAGTGATGTTTGGAGCTTTGGTGTAGTTCTTTATGAACTCATTACTGGGAGGCGAGCTGTTGAGAGAAACCTACCGAGAAATGAACAAAAGCTTTTGGAATGGGCAAGACATTATGTTTCTGACCCAAGGAAGTTCCATCTTCTGGTAGACCCACGGCTTGAAGGAGAATATTGCATTAAATCAGCTCAAAAACTTGCAACCCTAGCGAACAAGTGTCTTATGAAGCACCCGAAGTGCCGTCCTAAAATGAGTGAAGTGGTTGAGATACTGGGAAGCATAATTGACGGGACAATTTCTGAGTTTCAATGCAGTCTTCAAGCTGCTGTAAGTGAAGAAGAAGAAAAAGAAGAGAAGCTGTCTGAAGAGGACACCGAATCCGGGACCGCTAAACAAGGGAATAATTATCTGAAGAAGGTCTTGGACTTCAGAGAAATGATGAGTTTACGAAACAAGTCCATTAGAAGGTTGGATTGGAAAAATTGGGCGCCTGGTTTGGTACGAACTTGGTGA 1359 0.4489 MKCFHFSNAGGDPREVDDSVTSKASKLSWARSLSVASSTLGSRRSEFDSDSKDFSDSVEFHKFLSQKRANDLRVFSFSELKLATRGFSRALLIGEGGFGCVYKGVVRVPNGHANDGSLSDMDVAIKQLNRNGPQGHREWINEVNLLGVIKHPNLVKLVGYCAEDDERGIQRLLVYELMRNKSLEDHLLGRVPSTLTWISRLKIAQDAARGLGYLHEEMDFQLIFRDFKTSNVLLDEDFNAKLSDFGFARQGPSEGFGHVSTSVVGTVGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWARHYVSDPRKFHLLVDPRLEGEYCIKSAQKLATLANKCLMKHPKCRPKMSEVVEILGSIIDGTISEFQCSLQAAVSEEEEKEEKLSEEDTESGTAKQGNNYLKKVLDFREMMSLRNKSIRRLDWKNWAPGLVRTW 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03537 452 FunFam Serine/threonine-protein kinase BIK1 55 177 - -
Accr1g03537 452 SUPERFAMILY Protein kinase-like (PK-like) 70 373 IPR011009 -
Accr1g03537 452 Pfam Protein tyrosine and serine/threonine kinase 93 373 IPR001245 GO:0004672|GO:0006468
Accr1g03537 452 ProSiteProfiles Protein kinase domain profile. 87 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03537 452 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 386 - -
Accr1g03537 452 Gene3D Phosphorylase Kinase; domain 1 67 177 - -
Accr1g03537 452 ProSitePatterns Protein kinases ATP-binding region signature. 93 126 IPR017441 GO:0005524
Accr1g03537 452 Gene3D Transferase(Phosphotransferase) domain 1 178 397 - -
Accr1g03537 452 PANTHER OS01G0588500 PROTEIN-RELATED 49 375 - -
Accr1g03537 452 CDD STKc_IRAK 93 376 - -
Accr1g03537 452 Coils Coil 388 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03537 Accr-Chr1 71821716 71824076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03537 3 413 Glycoside Hydrolase AT3G07070 41.388 3.57e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr1g03537 PK_Tyr_Ser-Thr 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03537 - - qsa:O6P43_000204 682.945