Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03536 ATGGGTATTTGCTTGAGCGCCCAAATTAAAGCAGAGAGCCCATGCAACACAGGGCTGAATTCAAAATATGTGAGCAGTGGTGACGGAAAGGATGCGAGCAGCACAGGAAGCAAGGCGTCGGCGGTGTCAGTTCCTCAGACTTCAAGGAGTGTGGGAGAGATCTTGCAGTCATCCAATTTAAAGAGTTTCACTTTAGCAGAATTGAAGGCTGCCACCAGAAATTTCCGTCCAGATAGTGTGTTGGGAGAAGGTGGCTTCGGATCAGTGTATAAAGGGTGGATCGATGAGCACTCTCTGATTGCTGCCAAACCAGGGACTGGCATGGTTATTGCTGTCAAAAGACTTAATCAAGATGGTTTGCAAGGTCACAAGGAGTGGTTGGCCGAAGTGAACTACCTGGGACAGCTTTCTCACCCACATCTCGTGAAATTAATTGGTTATTGCCTGGAAGATGAACATCGTCTTTTGGTCTACGAATTCATGCCTCGAGGAAGCTTGGAGAATCATCTGTTCCGAAGAGGTTCATATTTTCAACCTCTCTCCTGGAGACTCCGGATGAAGGTTACTCTTGGCGCCGCCAAAGGACTTGCGTTTCTTCACAGCGGCAACATCAAAGTCATATACCGTGATTTCAAAACTTCAAATGTCTTGCTAGATGCCAAATATAATGCAAAACTTTCTGATTTCGGGCTGGCAAAGGACGGACCAACGGGCGACAGGAGTCACGTCTCCACCAGAGTCATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACAGGTCACCTGACGGCCAAGAGCGATGTGTATAGTTTTGGAGTTGTGCTACTGGAGATGTTATCGGGGCGACGAGCTGTTGATAAGAATAGGCCGGGTGGGCAGCACAATTTGGTGGAATGGGCAAAGCCCTGTTTGGCTAACAAGCGAAAGATCTTTCGCGTTATGGACAGTCGTTTGGAAGGTCAGTATTCGATCGACGAGGCGCATAAGACGGCGATGCTGGCTCTGCGATGCCTCTCCGCCGAGCCCAAAATAAGGCCCAACATGGATGAGGTTGTCAAAGCTCTGGAGCAGCTCCAAGTCTCGGTTGATGAAAATGGTGGAAGCCATCACAACTCTCGGCATCGTTCTCGGAGAAGAAGCGCCGATGACTTCACCGGCCGGAGAGCTTATCCCAGGCCCTCTGATTCTGCTCTCTATGCTTGA 1209 0.4946 MGICLSAQIKAESPCNTGLNSKYVSSGDGKDASSTGSKASAVSVPQTSRSVGEILQSSNLKSFTLAELKAATRNFRPDSVLGEGGFGSVYKGWIDEHSLIAAKPGTGMVIAVKRLNQDGLQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWRLRMKVTLGAAKGLAFLHSGNIKVIYRDFKTSNVLLDAKYNAKLSDFGLAKDGPTGDRSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPGGQHNLVEWAKPCLANKRKIFRVMDSRLEGQYSIDEAHKTAMLALRCLSAEPKIRPNMDEVVKALEQLQVSVDENGGSHHNSRHRSRRRSADDFTGRRAYPRPSDSALYA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03536 402 SUPERFAMILY Protein kinase-like (PK-like) 46 357 IPR011009 -
Accr1g03536 402 FunFam Serine/threonine-protein kinase BIK1 42 160 - -
Accr1g03536 402 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03536 402 Gene3D Transferase(Phosphotransferase) domain 1 161 383 - -
Accr1g03536 402 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Accr1g03536 402 FunFam Probable serine/threonine-protein kinase PBL8 161 377 - -
Accr1g03536 402 Pfam Protein tyrosine and serine/threonine kinase 79 357 IPR001245 GO:0004672|GO:0006468
Accr1g03536 402 PANTHER OS01G0588500 PROTEIN-RELATED 40 361 - -
Accr1g03536 402 CDD STKc_IRAK 81 360 - -
Accr1g03536 402 MobiDBLite consensus disorder prediction 24 44 - -
Accr1g03536 402 Gene3D Phosphorylase Kinase; domain 1 51 160 - -
Accr1g03536 402 MobiDBLite consensus disorder prediction 365 402 - -
Accr1g03536 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03536 Accr-Chr1 71801920 71803964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03536 53 365 Glycoside Hydrolase AT3G07070 50.318 2.32e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr1g03536 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03536 - - cave:132163413 639.802