Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03534 ATGGGCAACGGCATATGCAAATTGACCGTTTGCTTTACCGGCGGTGGCGGCCGTCAGCGGAAGCAGGAGATATCTTATTTGATCACTCAGCCTCTCGACGAGGGACTAGGCCACTCCTTCTGCTATGTTAGGCCCGATCCGACTCGCCTGTCTTCGTCCAAAGTTCACTGTGAGGAGACCACCACCTTCCGAACAATCTCCGGCGCATCTGTGAGTGCCAACACATCGACCCCTCTCTCAACAGCCTTCGTTGATTTGTACTCTTATGGTTCTATCGATAGAGCTGCAGCTTTCGAGAGTTCAACTTCTTTTGCTTCCCTTCCTCTACAGCCAATCCCTAGAAATCTCATGAATTCCGGCCCCTTCTCGGGAAATCTTGGTCCGATTCCTGGATCGGGTCCGCTAGAAAGAGGGTTCATGTCTGGCCCAATAGAGCGTGGATTCATGTCTGGTCCAATCGATCGGGGCTTGTTTTCGGGTCCCATGGAAAGGGGTGGTTCTGATCAATTTCAAAGAAGCTACTCTCACGGTGGTTTTGCGTTTAGACCCAGAACACGGAAAGGACGATGGATTCAAGTTCTTCAGAGGGCGATTTCAAAAACATTTTCTCAGGGGCAACACTCAATTGTCTCTTCAATCAAAGGGATTAAAGAACCGGAGTGGATTATCGAACCCGAGAGGCACAACGACAATATGATGGTCAGCAGTGTGAATTTCAGCAGCGATGGTAGTTTAGAAGATGATGATTCAATGGAAAGTCAAAATCTTCAATGGGCTCAAGGGAAAGCGGGCGAGGACAGAGTCCATGTTGTGGTATCAGAGGAGCACGGTTGGGTTTTCGTGGGGATTTACGATGGTTTTAATGGTCCTGATGCTCCCGACTACCTTGTGTCTAATTTGTATGGTTCTGTTCATAGAGAATTGAAGGGATTATTATGGGACGACGGGTCTGAATCCTCCAACGCCACCCCCGACATGTCCGGTCCTCCGATGAATAATTCTAATATGGAAGTGGAAGAATCGCTACAAAGCAGCGATAGTGATGTTGGGAAGGAAAGGACGATAAATGCTTGTTCTCAATGTATTGAGCAGGAGAATAATGATGCGTGCACAAGTGGGGATGCGAATATTGACAAGAGAAAGAGAGGTAAGAATGGCAAGAGCAAGTATAGAGGGGCAACAAAGAAATGGGAGGAGAATGAGAGAAGGTGGAAGTGTGAGTGGGATCGTGAAAGAGTAGAGCTTGATACGAGATTAAAGGAACAGTTGAATCGGTCTGGTTCTGGTGATTGTAACAACCCAATAAATCATTCAGATGTATTGGAAGCTCTTTCGGAGGCTCTGAGAAAAACAGAGGAGTCTTATCTAGAAATTGCTGATAAGATGGTGATGGAAAATCCGGAGCTGGCTCTGATGGGTTCGTGTGTTCTTGTAATGTTAATGAAAGGAGAGGATGTGTATGTCATGAATGTTGGGGATAGCAGAGCCGTGTTGGGTCAAAAGGCAGAGCCTGATTATTGGCTTGGCAAAATCAAGCAGGACTTGGAGAGGATCAATGAAGAAACAATGCATGATCTTGAATGTTTGGACGATGATAGATCAAACTTGGTGCCCAGTCTAAGCGCGTGTCAGCTCACCAAGGATCATTGTACCAATGTTGAGGAAGAAGTCCAGAGAATACTGAGAGAACACCCGGATGATGCTTGTGCAGTGCTAAATGATCGTGTTAAGGGTTCCCTGAAGGTTACTCGAGCATTTGGTGCCGGATATCTCAAACAGCCGAAGTGGAATAATGCGCTTCTGGAGATGTTCAGAATAGACTATGTAGGAACTTCTCCTTACATAACCTGCCTGCCATACTTGAAGCACCACAGATTAGGGGCAAAGGACAAATTTTTGATACTATCATCCGATGGACTTTATCAATACTTGACGAACGAAGAAGCAGTAGCTGAAGTTGAGCTTTTTATCACGTTGCAGCCTGAGGGAGACCCCGCTCAGCATTTGGTTGAAGAAGTTCTCTTCCGTGCTGCAAAAAAAGCTGGTTTGGACTTCCATGAGCTGCTGGAAATACCACAGGGAGACAGGCGTCGTTACCACGATGATGTTTCGATCATTGTTATTTCCTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2160 0.4634 MGNGICKLTVCFTGGGGRQRKQEISYLITQPLDEGLGHSFCYVRPDPTRLSSSKVHCEETTTFRTISGASVSANTSTPLSTAFVDLYSYGSIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGPIPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMERGGSDQFQRSYSHGGFAFRPRTRKGRWIQVLQRAISKTFSQGQHSIVSSIKGIKEPEWIIEPERHNDNMMVSSVNFSSDGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLVSNLYGSVHRELKGLLWDDGSESSNATPDMSGPPMNNSNMEVEESLQSSDSDVGKERTINACSQCIEQENNDACTSGDANIDKRKRGKNGKSKYRGATKKWEENERRWKCEWDRERVELDTRLKEQLNRSGSGDCNNPINHSDVLEALSEALRKTEESYLEIADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLGQKAEPDYWLGKIKQDLERINEETMHDLECLDDDRSNLVPSLSACQLTKDHCTNVEEEVQRILREHPDDACAVLNDRVKGSLKVTRAFGAGYLKQPKWNNALLEMFRIDYVGTSPYITCLPYLKHHRLGAKDKFLILSSDGLYQYLTNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03534 719 Coils Coil 441 461 - -
Accr1g03534 719 PANTHER PROTEIN PHOSPHATASE 2C 246 708 IPR015655 GO:0004722|GO:0006470
Accr1g03534 719 MobiDBLite consensus disorder prediction 369 389 - -
Accr1g03534 719 MobiDBLite consensus disorder prediction 314 336 - -
Accr1g03534 719 Pfam Protein phosphatase 2C 439 666 IPR001932 -
Accr1g03534 719 SUPERFAMILY PP2C-like 262 711 IPR036457 -
Accr1g03534 719 Gene3D - 230 715 IPR036457 -
Accr1g03534 719 ProSiteProfiles PPM-type phosphatase domain profile. 248 710 IPR001932 -
Accr1g03534 719 Coils Coil 512 532 - -
Accr1g03534 719 SMART PP2C_4 249 708 IPR001932 -
Accr1g03534 719 MobiDBLite consensus disorder prediction 316 336 - -
Accr1g03534 719 CDD PP2Cc 436 710 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03534 Accr-Chr1 71775334 71777866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03534 1 719 PP2C-type Phosphatase Gene Family AT2G28890 66.896 0.0 938
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03534 - - qsa:O6P43_000210 1169.84