Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03529 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCATCAGCAGCAACAAACTTATCATCATCAGACAAATGAGACGTGTGAGCCTCCACCACTGCCTCCACAAGCCCCTCATATGGGCTCAATCAGGCCCGGATCGATGGCGGATCGAGCCCGGCTAGCGAAGATACCGCCGCCGGAGGCAGCTCTCAAGTGTCCTCGCTGTGAATCAACTAACACAAAATTCTGCTACTTCAACAACTACAGCCTGTCTCAACCCAGACACTTCTGCAAGACCTGTAGGCGTTACTGGACAAGAGGCGGCGCTCTCAGGAACGTTCCAGTCGGCGGAGGATGCCGCCGAAACAAGAAGAGCAGTAGAAGCCGATCCAAGTCTCCGGCAGCCTCTGACAGGCAGCCACCGTCCAACCCCTCAGGCGGCGGGGCCGCCACCATAGCCACCGAGCTGATTGGTCAATTGCCGTCCCAAGCATCTAATATACCTTTCATGGCGTCCTTACAGAATCTGAGTCGCTATGGAGTGGGAAGCATGGGCCTCAACTTGCAAGGACAGAGTGATCACATGTATCCCATTGGGCTTAATGGAAGTAATATTTCAAGCGGAGGACTAGATCAGTGGCGGTTAAAGCAGTTTCCCAATTTCTTGAATGGTTTCGATCAGTCAATTTCAGCTGCTTCAAACCCATTTCATCAAAGCGAACTCGGCAGTTCTAGGGCTACGCAACTGCCTCCAGTGAAATCGGAAGAGAACGGAGCCCTAAATTTGTCTAGGTCGCAAGATCCGAGCATATCAGAAAATAACTACCAGTACTATTCATGGACTCCTACCACTGATATTATATCAGGCCTTGCCTCTTCTTCCACCACCCATGTTCTGTAA 888 0.5068 MVFSSIPVYLDPPNWHQQQQTYHHQTNETCEPPPLPPQAPHMGSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSSRSRSKSPAASDRQPPSNPSGGGAATIATELIGQLPSQASNIPFMASLQNLSRYGVGSMGLNLQGQSDHMYPIGLNGSNISSGGLDQWRLKQFPNFLNGFDQSISAASNPFHQSELGSSRATQLPPVKSEENGALNLSRSQDPSISENNYQYYSWTPTTDIISGLASSSTTHVL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03529 295 MobiDBLite consensus disorder prediction 232 247 - -
Accr1g03529 295 MobiDBLite consensus disorder prediction 232 263 - -
Accr1g03529 295 Pfam Dof domain, zinc finger 65 120 IPR003851 GO:0003677|GO:0006355
Accr1g03529 295 MobiDBLite consensus disorder prediction 25 48 - -
Accr1g03529 295 MobiDBLite consensus disorder prediction 128 145 - -
Accr1g03529 295 ProSiteProfiles Zinc finger Dof-type profile. 66 120 IPR003851 GO:0003677|GO:0006355
Accr1g03529 295 ProSitePatterns Zinc finger Dof-type signature. 68 104 IPR003851 GO:0003677|GO:0006355
Accr1g03529 295 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 219 IPR045174 GO:0003700|GO:0006355
Accr1g03529 295 MobiDBLite consensus disorder prediction 110 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03529 Accr-Chr1 71756852 71757902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03529 2 294 C2C2-Dof Transcription Factor Family AT3G55370 41.284 4.00e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr1g03529 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03529 - - gmx:100816635 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03529 1 71756852 71757902 Accr13g00172 13 1533714 1534869 CCT