Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03519 ATGTCTTACCGAAGCAAGGGATTTTGGACGTTAAAGGGCACTGGACATATCAATAACAGAGGTACCGATATTCCTTCTAAAATTGAATCAAAACGAACTCATCGATGGTTTATTGATGCTGCCGAAGTAGATTTGTTTCCAAACAAGAAACAAGCAGTGGAAGATGAAAATGGAAAGTCAGGTTCAGGAATTTCAAGTATAAATTTTTCTCACTGGGAGAACAATCCTAATTTAAATTCAGTTCCTAACCAATTTATCGGCAGACTATTTGGGTCTGAATCTAAGCCTGTCAATTTCGAGGAAACAAATAGTTCTTACGTTGTGGGTAATAATTCTAATGTGAAGACGAAAATGATAAGCAATCAATACAGAGAAGATGCATCTGAAGAAACTGAAGCACGTCTAAGCTTTGGTGGAAGTAAAGAAGTCAAAGCTAATTGGGTTAAGGATTCTGATATTGTACAGGCTGAAGCCAGATACAATTTGGTCAGGCAGGATAACAGTGATCTGCGTCAGGCTTATAATGGTGAGGCTGAGATGGGCTATATGTCAATAGGGCAAGCTTTTGATAAAGGTAGTAATGTGTCTCTCATGGAACTTTCCTCCAACAGGGCGGATGCCCATGTTAGACCATTGGGTGAGGCCTATGGTAAAGGTTATGATAATGCCGTATCAGTTGGTGATTCCTATGATAAAGAGGACGCAAATACAATATCTTTTCGTGGGTTCCCAGATGAACAGGACATTTTCCCTGTGGACAGGCCTTCTGGGGACTTTGGTCCTTTATATAATCCATCTTCGGTTCAAGTATCAACAACAGCCGATGAGAGAGTGTTGAATGCATCAAATTCCAATGGAACTGTAAGTATTCCCCTGGTAGATGAACTAAAGCCTGAACCTGTGGCCAAGAATAATCCAGAGCTCAAAGCAGCGAAGAGAGAAGCTACAAATAGCTTCCCTTCTAATGTCAGAAGCTTGATATCCACTGGTATGCTTGATGGCGTCCCTGTAAAGTATGTCTCAGTTTCCCGGGAGGAACTTAGGGGGATTATAAAAGGTTCTGGCTATCTTTGTGGGTGCCAATCATGTAATTATTCCAAGGTTCTGAACGCTTACGAGTTTGAGAGACACGCTGGTTGCAAAACAAAACATCCAAACAATCACATTTATTTTGAGAACGGGAAGACCATCTATCAGATTGTACAGGAGCTGAGGAGTACCCCTGAAAGTTTGTTGTTTGATTCAATCCAAACAGTTTTCGGTGCACCGATTAATCAGAAAGCATTCCGCAATTGGAAAGAATCTTTTCAAGCAGCCACACGTGAGCTTCAACGTATTTATGGAAAGAACGAACTAAGCATATGA 1365 0.4088 MSYRSKGFWTLKGTGHINNRGTDIPSKIESKRTHRWFIDAAEVDLFPNKKQAVEDENGKSGSGISSINFSHWENNPNLNSVPNQFIGRLFGSESKPVNFEETNSSYVVGNNSNVKTKMISNQYREDASEETEARLSFGGSKEVKANWVKDSDIVQAEARYNLVRQDNSDLRQAYNGEAEMGYMSIGQAFDKGSNVSLMELSSNRADAHVRPLGEAYGKGYDNAVSVGDSYDKEDANTISFRGFPDEQDIFPVDRPSGDFGPLYNPSSVQVSTTADERVLNASNSNGTVSIPLVDELKPEPVAKNNPELKAAKREATNSFPSNVRSLISTGMLDGVPVKYVSVSREELRGIIKGSGYLCGCQSCNYSKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDSIQTVFGAPINQKAFRNWKESFQAATRELQRIYGKNELSI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03519 454 PANTHER AUTOIMMUNE REGULATOR 18 153 - -
Accr1g03519 454 Coils Coil 153 173 - -
Accr1g03519 454 Pfam Tify domain binding domain 349 404 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03519 Accr-Chr1 71655525 71658535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03519 290 437 PHD Transcription Factor Family AT3G53680 49.673 2.07e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03519 - - gmx:100802229 612.838