Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03518 ATGAAGAGAGCAAGAGATGAAGGTGAGTCAGAGGGCTTAAACGTGGTTAAGTGTTTGATGTTGCTGTCCAGAGTTGGGGTGACCAACCCTTCCTCACAGTGTAGTGATGGTGGTTTTAAGTGCAAGACTTGTTACAGAGTGTTCCCTACTTTTCAAGCTCTTGGAGGGCACCGAGCCAGCCACAAGAGGCCCAAGCTCAGGCTTTCTTCCTCACATGATCTGCCTGTGAAGCTCAACAAGACTCACCCATGCCCCATTTGCGGAGTCGAGTTTGGAATCGGACAAGCCCTCGGAGGTCACATGAGAAAGCATAGAACTACTCCTGTTAATAAGCATAATAACTTTGATTCATGCTTGGACTTGAACTTGACGCCGTTAGAAAATGATGCTCTCAACCTCCACTTGAGGACGCCCCTCGTTAATTCTTTTGTTTGA 435 0.4736 MKRARDEGESEGLNVVKCLMLLSRVGVTNPSSQCSDGGFKCKTCYRVFPTFQALGGHRASHKRPKLRLSSSHDLPVKLNKTHPCPICGVEFGIGQALGGHMRKHRTTPVNKHNNFDSCLDLNLTPLENDALNLHLRTPLVNSFV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03518 144 SUPERFAMILY beta-beta-alpha zinc fingers 39 104 IPR036236 -
Accr1g03518 144 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Accr1g03518 144 SMART c2h2final6 82 104 IPR013087 -
Accr1g03518 144 SMART c2h2final6 39 61 IPR013087 -
Accr1g03518 144 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Accr1g03518 144 PANTHER ZINC FINGER PROTEIN ZAT5 16 128 - -
Accr1g03518 144 Gene3D Classic Zinc Finger 37 104 - -
Accr1g03518 144 Pfam C2H2-type zinc finger 82 106 - -
Accr1g03518 144 Pfam C2H2-type zinc finger 39 64 - -
Accr1g03518 144 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03518 Accr-Chr1 71646129 71646563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03518 1 131 C2H2 Transcription Factor Family AT3G53600 43.671 3.27e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g03518 zf-C2H2_6 4.3e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03518 - - gmx:100781211 154.451